Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AC110597.1-201ENST00000562669 3176 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AL096829.1-201ENST00000413677 457 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 RPL34P3-201ENST00000421454 338 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 SUMO2P3-201ENST00000438311 288 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 GEMIN2P1-201ENST00000454246 752 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 EIF3LP3-201ENST00000495197 822 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AC091917.2-201ENST00000505002 744 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 IGKV2-18-201ENST00000522607 343 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 MIR1273E-201ENST00000581165 102 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AL589674.2-201ENST00000604304 337 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 FAM27E4-201ENST00000605259 342 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AC012254.3-201ENST00000591183 2117 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 ORC3-206ENST00000546266 2470 ntTSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AL590542.1-201ENST00000449314 1596 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AP004289.1-201ENST00000436307 2205 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 AC009237.3-203ENST00000442128 3551 ntBASIC6.05□□□□□ -1.44
LYSMD4Q5XG99 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 MFSD8-217ENST00000641178 4374 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC105235.1-201ENST00000623208 1816 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 GUCY1B2-204ENST00000531898 1979 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 BX322650.1-201ENST00000332359 2143 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 OR7E101P-201ENST00000400428 513 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC005487.1-201ENST00000440208 665 ntTSL 5 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 NPM1P27-201ENST00000502784 830 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 TRIM36-IT1-201ENST00000503723 881 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC008429.4-201ENST00000521201 182 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC084337.1-201ENST00000524809 686 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC015818.6-201ENST00000584274 634 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC022960.2-201ENST00000616300 666 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC092111.1-201ENST00000618256 3358 ntBASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
LYSMD4Q5XG99 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms