Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 RFPL4AP3-201ENST00000515267 345 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 MIR3908-201ENST00000579798 126 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 VN1R81P-201ENST00000602085 372 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 MIR6768-201ENST00000610734 72 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC068726.1-201ENST00000610993 341 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AL356752.1-201ENST00000615844 593 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AC016769.4-201ENST00000616893 535 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 MRPL57P3-201ENST00000619218 176 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 SNORA16A-202ENST00000628458 135 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 AL139254.3-201ENST00000641097 674 ntBASIC5.4□□□□□ -1.54
PDLIM3Q53GG5 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 RACGAP1P-201ENST00000550663 1879 ntBASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 DTNA-201ENST00000269192 1964 ntTSL 2 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.4□□□□□ -1.55
PDLIM3Q53GG5 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 ROR1-AS1-201ENST00000412349 1574 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 RN7SKP186-201ENST00000365371 303 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 RNU1-55P-201ENST00000365510 158 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 RN7SKP81-201ENST00000365603 331 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 RNA5SP176-201ENST00000390956 110 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 RBBP4P5-201ENST00000398583 1266 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 CHEK2P5-201ENST00000423877 246 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 OR6C72P-201ENST00000451403 892 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 HMGN1P8-201ENST00000463578 288 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 UOX-201ENST00000471089 899 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC091874.2-201ENST00000505889 720 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC023968.1-201ENST00000560719 475 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC025171.4-201ENST00000607250 1047 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC117490.2-201ENST00000610042 594 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC096586.2-201ENST00000610260 441 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 SNX18P12-201ENST00000624821 759 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AP000432.2-201ENST00000624164 2048 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 LRRC37A15P-201ENST00000514785 1355 ntBASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC5.39□□□□□ -1.55
PDLIM3Q53GG5 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM3Q53GG5 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM3Q53GG5 PGM3-215ENST00000616566 5905 ntTSL 2 BASIC5.38□□□□□ -1.55
PDLIM3Q53GG5 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDLIM3Q53GG5 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms