Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 AC026700.1-201ENST00000512074 544 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AC114801.1-201ENST00000512633 297 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 RNU6-405P-201ENST00000516637 110 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AP001000.1-201ENST00000526843 742 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC7.21□□□□□ -1.26
PCDH1Q08174 SERPINE4P-201ENST00000554978 281 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 ELOCP28-201ENST00000590044 317 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 CR382285.1-202ENST00000604687 547 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AL136985.2-201ENST00000607372 535 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC010333.3-201ENST00000615100 402 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 CCL4L2-212ENST00000615418 954 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 AL607023.1-201ENST00000620045 248 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH1Q08174 NF1P8-201ENST00000415351 1461 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 AP000866.1-202ENST00000529392 2792 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH1Q08174 AP004289.1-201ENST00000436307 2205 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 DCP1A-201ENST00000294241 1853 ntTSL 2 BASIC7.21□□□□□ -1.26
PCDH1Q08174 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 PDGFC-203ENST00000502773 4165 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 AC012213.2-201ENST00000562917 4597 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.21□□□□□ -1.26
PCDH1Q08174 BX322650.1-201ENST00000332359 2143 ntBASIC7.21□□□□□ -1.26
PCDH1Q08174 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
PCDH1Q08174 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 KARSP1-201ENST00000451871 1752 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 NBPF8-201ENST00000583271 5330 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 WNK1-220ENST00000574564 1401 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 EIF2S3-201ENST00000253039 2858 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 RNF217-AS1-201ENST00000439075 4507 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 CR848007.1-201ENST00000442354 1699 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
PCDH1Q08174 RNA5SP27-201ENST00000363839 119 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC7.2□□□□□ -1.26
PCDH1Q08174 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 HMGB3P1-201ENST00000393368 573 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 UNC50-203ENST00000409347 1276 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC023141.10-201ENST00000415634 200 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AL513325.1-201ENST00000417716 1034 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 RPS26P13-201ENST00000419030 330 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC007679.2-201ENST00000422116 781 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 KRTAP3-4P-201ENST00000430780 280 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 Z98949.3-201ENST00000436423 472 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AL671855.1-201ENST00000446875 1203 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 HCG17-214ENST00000453558 732 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC104849.1-201ENST00000462623 405 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC015820.1-201ENST00000473882 321 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC037198.2-201ENST00000478845 733 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 RPL23AP82-208ENST00000496652 1112 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC138853.1-201ENST00000503549 823 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 PTTG3P-201ENST00000521862 606 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 OR5AZ1P-201ENST00000527448 943 ntBASIC7.2□□□□□ -1.26
PCDH1Q08174 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AP000907.3-201ENST00000530733 322 ntTSL 3 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.2□□□□□ -1.26
PCDH1Q08174 LINC02330-201ENST00000557784 555 ntTSL 4 BASIC7.2□□□□□ -1.26
PCDH1Q08174 AC092133.1-201ENST00000565828 719 ntBASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms