Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AP003789.1-201ENST00000617737 605 ntBASIC5.8□□□□□ -1.48
LTBQ06643 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
LTBQ06643 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBQ06643 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBQ06643 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
LTBQ06643 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 RARSP1-201ENST00000542842 1418 ntBASIC5.8□□□□□ -1.48
LTBQ06643 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.8□□□□□ -1.48
LTBQ06643 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 KARSP1-201ENST00000451871 1752 ntBASIC5.8□□□□□ -1.48
LTBQ06643 CUBNP3-201ENST00000457461 1784 ntBASIC5.8□□□□□ -1.48
LTBQ06643 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC5.8□□□□□ -1.48
LTBQ06643 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
LTBQ06643 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.8□□□□□ -1.48
LTBQ06643 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LTBQ06643 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
LTBQ06643 PRELID1P1-201ENST00000403549 660 ntBASIC5.79□□□□□ -1.48
LTBQ06643 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 RN7SKP281-201ENST00000410472 352 ntBASIC5.79□□□□□ -1.48
LTBQ06643 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 Z93019.1-201ENST00000416450 973 ntBASIC5.79□□□□□ -1.48
LTBQ06643 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 MRPS21P5-201ENST00000417885 231 ntBASIC5.79□□□□□ -1.48
LTBQ06643 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.79□□□□□ -1.48
LTBQ06643 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 AL590762.3-201ENST00000436372 640 ntBASIC5.79□□□□□ -1.48
LTBQ06643 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 MTCO3P43-201ENST00000440974 771 ntBASIC5.79□□□□□ -1.48
LTBQ06643 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBQ06643 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 AC018645.1-201ENST00000505003 109 ntBASIC5.79□□□□□ -1.48
LTBQ06643 RN7SKP248-201ENST00000516278 305 ntBASIC5.79□□□□□ -1.48
LTBQ06643 AL133399.1-201ENST00000527476 298 ntBASIC5.79□□□□□ -1.48
LTBQ06643 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 AC090115.2-201ENST00000548060 883 ntBASIC5.79□□□□□ -1.48
LTBQ06643 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.79□□□□□ -1.48
LTBQ06643 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.79□□□□□ -1.48
LTBQ06643 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBQ06643 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBQ06643 MTND4LP25-201ENST00000570218 163 ntBASIC5.79□□□□□ -1.48
LTBQ06643 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC5.79□□□□□ -1.48
LTBQ06643 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.79□□□□□ -1.48
LTBQ06643 AC063977.7-201ENST00000594454 337 ntBASIC5.79□□□□□ -1.48
LTBQ06643 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 AP003117.1-201ENST00000602771 554 ntBASIC5.79□□□□□ -1.48
LTBQ06643 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.79□□□□□ -1.48
LTBQ06643 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 LINC02495-203ENST00000636704 242 ntBASIC5.79□□□□□ -1.48
LTBQ06643 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.79□□□□□ -1.48
LTBQ06643 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 DPY19L1P1-201ENST00000417811 2594 ntBASIC5.79□□□□□ -1.48
LTBQ06643 AP004289.1-201ENST00000436307 2205 ntBASIC5.79□□□□□ -1.48
LTBQ06643 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.79□□□□□ -1.48
LTBQ06643 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LTBQ06643 AC119674.1-213ENST00000641177 1386 ntBASIC5.79□□□□□ -1.48
LTBQ06643 BIN2P1-201ENST00000504996 1530 ntBASIC5.79□□□□□ -1.48
LTBQ06643 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC5.78□□□□□ -1.48
LTBQ06643 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.78□□□□□ -1.48
LTBQ06643 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC5.78□□□□□ -1.48
LTBQ06643 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC5.78□□□□□ -1.48
LTBQ06643 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LTBQ06643 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
LTBQ06643 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 165.4 ms