Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 OR56A4-201ENST00000330728 1209 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CX3CL1P78423 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.14□□□□□ -1.59
CX3CL1P78423 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CL1P78423 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
CX3CL1P78423 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.14□□□□□ -1.59
CX3CL1P78423 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CL1P78423 AL360271.1-201ENST00000395679 510 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AL391419.1-201ENST00000398901 1275 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AL121823.1-201ENST00000418369 741 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CL1P78423 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CL1P78423 AP000949.1-201ENST00000438328 629 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 Z99127.2-201ENST00000441426 334 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AL031681.1-201ENST00000443304 400 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AL020997.1-201ENST00000446554 349 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AL445991.1-201ENST00000450381 475 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AP002345.1-201ENST00000456493 928 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 STRADBP1-201ENST00000478954 1281 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 RN7SL413P-201ENST00000482700 297 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC5.14□□□□□ -1.59
CX3CL1P78423 NPM1P27-201ENST00000502784 830 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CL1P78423 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.14□□□□□ -1.59
CX3CL1P78423 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CL1P78423 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CL1P78423 MTND1P36-201ENST00000522384 936 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5.14□□□□□ -1.59
CX3CL1P78423 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CL1P78423 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.14□□□□□ -1.59
CX3CL1P78423 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 AC004805.3-201ENST00000603178 310 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 RNU6-84P-201ENST00000607737 102 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AL592494.3-201ENST00000609485 464 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.14□□□□□ -1.59
CX3CL1P78423 FO681491.1-202ENST00000623392 737 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AC020978.9-201ENST00000624380 1141 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 AP001153.1-201ENST00000641024 338 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CX3CL1P78423 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CX3CL1P78423 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.14□□□□□ -1.59
CX3CL1P78423 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
CX3CL1P78423 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
CX3CL1P78423 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CX3CL1P78423 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 SAGE3P-201ENST00000619800 1635 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AC112255.1-201ENST00000624070 2493 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 RNU1-59P-201ENST00000364829 162 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 RNA5SP115-201ENST00000411160 107 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 UBTFL2-201ENST00000411859 1191 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CL1P78423 RPS17P17-201ENST00000419392 409 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AL034379.1-201ENST00000423216 253 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC021876.1-201ENST00000425959 359 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CX3CL1P78423 RPEP4-201ENST00000437636 602 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CL1P78423 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 PA2G4P1-201ENST00000442248 1197 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CL1P78423 VN1R38P-201ENST00000450265 887 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 CCNJP2-201ENST00000457810 1163 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC015524.1-201ENST00000491585 472 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 FABP5P6-201ENST00000510588 409 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CL1P78423 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC021269.1-201ENST00000526860 705 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AP005639.1-201ENST00000526939 192 ntBASIC5.13□□□□□ -1.59
CX3CL1P78423 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CL1P78423 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
CX3CL1P78423 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.13□□□□□ -1.59
CX3CL1P78423 DCN-209ENST00000546745 1026 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms