Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC092634.1-201ENST00000366505 199 ntBASIC5.27□□□□□ -1.57
ACTBP60709 AC026310.1-201ENST00000396004 378 ntBASIC5.27□□□□□ -1.57
ACTBP60709 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTBP60709 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 AL589794.1-201ENST00000424971 390 ntBASIC5.27□□□□□ -1.57
ACTBP60709 AP003385.1-201ENST00000426387 893 ntBASIC5.27□□□□□ -1.57
ACTBP60709 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 AC013403.1-201ENST00000436954 263 ntBASIC5.27□□□□□ -1.57
ACTBP60709 RPSAP40-201ENST00000442343 891 ntBASIC5.27□□□□□ -1.57
ACTBP60709 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTBP60709 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTBP60709 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTBP60709 AKR1D1P1-201ENST00000457236 936 ntBASIC5.27□□□□□ -1.57
ACTBP60709 RPL5P33-201ENST00000487833 905 ntBASIC5.27□□□□□ -1.57
ACTBP60709 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTBP60709 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTBP60709 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTBP60709 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTBP60709 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 AC244502.2-201ENST00000543361 851 ntBASIC5.27□□□□□ -1.57
ACTBP60709 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 NIFKP4-201ENST00000567275 1192 ntBASIC5.27□□□□□ -1.57
ACTBP60709 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.27□□□□□ -1.57
ACTBP60709 RPL7AP69-201ENST00000595306 806 ntBASIC5.27□□□□□ -1.57
ACTBP60709 AL158152.1-201ENST00000602652 1435 ntBASIC5.27□□□□□ -1.57
ACTBP60709 SNORD96A-201ENST00000606577 79 ntBASIC5.27□□□□□ -1.57
ACTBP60709 RAB28P4-201ENST00000622233 665 ntBASIC5.27□□□□□ -1.57
ACTBP60709 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTBP60709 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.27□□□□□ -1.57
ACTBP60709 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
ACTBP60709 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
ACTBP60709 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.27□□□□□ -1.57
ACTBP60709 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.26□□□□□ -1.57
ACTBP60709 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 PPIAP24-201ENST00000328558 471 ntBASIC5.26□□□□□ -1.57
ACTBP60709 RNU1-5P-201ENST00000362684 144 ntBASIC5.26□□□□□ -1.57
ACTBP60709 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.26□□□□□ -1.57
ACTBP60709 RANP7-201ENST00000418085 644 ntBASIC5.26□□□□□ -1.57
ACTBP60709 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 MED28P4-201ENST00000433137 572 ntBASIC5.26□□□□□ -1.57
ACTBP60709 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.26□□□□□ -1.57
ACTBP60709 CCNJP1-201ENST00000450600 1149 ntBASIC5.26□□□□□ -1.57
ACTBP60709 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 NPM1P9-201ENST00000453156 844 ntBASIC5.26□□□□□ -1.57
ACTBP60709 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 RN7SL790P-201ENST00000474043 298 ntBASIC5.26□□□□□ -1.57
ACTBP60709 RN7SL714P-201ENST00000487050 298 ntBASIC5.26□□□□□ -1.57
ACTBP60709 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.26□□□□□ -1.57
ACTBP60709 AC090958.1-201ENST00000511122 351 ntBASIC5.26□□□□□ -1.57
ACTBP60709 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.26□□□□□ -1.57
ACTBP60709 AC131935.1-201ENST00000524621 333 ntBASIC5.26□□□□□ -1.57
ACTBP60709 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 AC005519.1-201ENST00000554490 601 ntBASIC5.26□□□□□ -1.57
ACTBP60709 OR4C49P-201ENST00000563891 900 ntBASIC5.26□□□□□ -1.57
ACTBP60709 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.26□□□□□ -1.57
ACTBP60709 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.26□□□□□ -1.57
ACTBP60709 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.26□□□□□ -1.57
ACTBP60709 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.26□□□□□ -1.57
ACTBP60709 MIR6849-201ENST00000618543 69 ntBASIC5.26□□□□□ -1.57
ACTBP60709 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 AC079776.5-201ENST00000641920 211 ntBASIC5.26□□□□□ -1.57
ACTBP60709 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 AL022311.1-201ENST00000623726 19416 ntBASIC5.26□□□□□ -1.57
ACTBP60709 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
ACTBP60709 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.26□□□□□ -1.57
ACTBP60709 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
ACTBP60709 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 630.2 ms