Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 MUC4-209ENST00000463781 17110 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
RHBDL3P58872 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RHBDL3P58872 OR11H13P-201ENST00000359695 979 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 SUGT1P2-201ENST00000379452 992 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC092642.1-201ENST00000392417 425 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 GAPDHP23-201ENST00000444823 993 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 RANP2-201ENST00000456833 229 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 SNX18P26-201ENST00000458433 740 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AK4P6-201ENST00000505168 528 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 SUMO2P7-201ENST00000511179 285 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.41□□□□□ -1.22
RHBDL3P58872 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.41□□□□□ -1.22
RHBDL3P58872 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC108673.3-201ENST00000609183 335 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC7.41□□□□□ -1.22
RHBDL3P58872 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC012254.5-201ENST00000623573 478 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 AC018628.1-201ENST00000624147 3819 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 AL139254.3-201ENST00000641097 674 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.41□□□□□ -1.22
RHBDL3P58872 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RHBDL3P58872 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 OPALIN-201ENST00000371172 3557 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 AC091305.2-201ENST00000624049 1576 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 UG0898H09-202ENST00000623646 7040 ntBASIC7.41□□□□□ -1.22
RHBDL3P58872 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RHBDL3P58872 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC7.4□□□□□ -1.22
RHBDL3P58872 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RHBDL3P58872 MIER3-205ENST00000409421 2152 ntTSL 2 BASIC7.4□□□□□ -1.22
RHBDL3P58872 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 AC012213.2-201ENST00000562917 4597 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
RHBDL3P58872 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
RHBDL3P58872 SNORA43.1-201ENST00000364863 140 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AC245096.1-201ENST00000413104 546 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 RPS3P2-201ENST00000421346 701 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 NPM1P26-201ENST00000426339 738 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 NDUFA5P1-201ENST00000433858 341 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 VN1R38P-201ENST00000450265 887 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 CFL1P4-201ENST00000451536 498 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 MTND3P4-201ENST00000453537 303 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AC105918.1-201ENST00000474399 838 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AC104997.1-201ENST00000519761 717 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
RHBDL3P58872 BICD1-206ENST00000551086 423 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.4□□□□□ -1.22
RHBDL3P58872 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
RHBDL3P58872 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.4□□□□□ -1.22
RHBDL3P58872 AC233702.7-202ENST00000582941 211 ntBASIC7.4□□□□□ -1.22
RHBDL3P58872 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms