Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 LRP2BP-203ENST00000510776 3055 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
EPHB3P54753 AMPD3-209ENST00000529507 3156 ntAPPRIS P1 TSL 2 BASIC7.04□□□□□ -1.28
EPHB3P54753 UGT2B25P-201ENST00000511504 1586 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 LRRC37B-203ENST00000394713 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 SPATS2-222ENST00000552918 2993 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 AL359396.1-201ENST00000623151 2376 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
EPHB3P54753 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 GLRA3-201ENST00000274093 8770 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.03□□□□□ -1.28
EPHB3P54753 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
EPHB3P54753 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
EPHB3P54753 MIR199B-201ENST00000384849 110 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 MIR513B-201ENST00000385136 84 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 RN7SKP271-201ENST00000410528 320 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 RN7SKP296-201ENST00000411185 341 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC096533.1-201ENST00000411645 353 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC7.03□□□□□ -1.28
EPHB3P54753 AL929472.1-201ENST00000417484 429 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AL139158.1-201ENST00000424719 340 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC7.03□□□□□ -1.28
EPHB3P54753 RPL5P2-201ENST00000429598 854 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 MTND1P4-201ENST00000435196 415 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC7.03□□□□□ -1.28
EPHB3P54753 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC7.03□□□□□ -1.28
EPHB3P54753 RPL7P33-201ENST00000444159 742 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 OR2L9P-201ENST00000444456 913 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 MTND2P4-201ENST00000445034 1004 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 TPTE2P6-202ENST00000445572 1007 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 AC097359.1-201ENST00000447946 463 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC118758.1-202ENST00000454719 225 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 SSR3-206ENST00000476217 807 ntTSL 3 BASIC7.03□□□□□ -1.28
EPHB3P54753 AC122718.2-201ENST00000505325 591 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 SUMO2P5-201ENST00000506790 245 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 RNA5SP473-201ENST00000516402 125 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC7.03□□□□□ -1.28
EPHB3P54753 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 UBTFL9-201ENST00000534504 1148 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC7.03□□□□□ -1.28
EPHB3P54753 AC016144.1-201ENST00000548175 1087 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC7.03□□□□□ -1.28
EPHB3P54753 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC7.03□□□□□ -1.28
EPHB3P54753 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC7.03□□□□□ -1.28
EPHB3P54753 AC092718.4-201ENST00000566639 716 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 MIR4271-201ENST00000582451 67 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.03□□□□□ -1.28
EPHB3P54753 VN1R78P-201ENST00000597393 564 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC7.03□□□□□ -1.28
EPHB3P54753 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC7.03□□□□□ -1.28
EPHB3P54753 NTAN1P1-201ENST00000603150 646 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC064872.1-201ENST00000604823 1072 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 SNORD96A-201ENST00000606577 79 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AC004241.3-201ENST00000611728 517 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 uc_338.29-201ENST00000615099 168 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 MIR6806-201ENST00000622141 64 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 AL603839.4-201ENST00000624658 1005 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 SNX18P10-201ENST00000625014 519 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 FRG1EP-201ENST00000634469 770 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 SLA-201ENST00000338087 3451 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC7.03□□□□□ -1.28
EPHB3P54753 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 AC009166.2-201ENST00000624410 2833 ntBASIC7.03□□□□□ -1.28
EPHB3P54753 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
EPHB3P54753 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
EPHB3P54753 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.28
EPHB3P54753 SGO1P1-201ENST00000603525 1447 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC7.02□□□□□ -1.29
EPHB3P54753 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
EPHB3P54753 OR4Q3-202ENST00000642117 2165 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
EPHB3P54753 AC022075.1-201ENST00000500682 2830 ntTSL 2 BASIC7.02□□□□□ -1.29
EPHB3P54753 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
EPHB3P54753 PAICS-208ENST00000514888 3340 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 BRD7P1-201ENST00000557705 1915 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
EPHB3P54753 BMS1P3-201ENST00000372011 932 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 SNORD116-9-201ENST00000384000 95 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 SNORD116-3-201ENST00000384287 95 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 SNORD116-7-201ENST00000384404 95 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 SNORD116-5-201ENST00000384462 95 ntBASIC7.02□□□□□ -1.29
EPHB3P54753 RNU6-906P-201ENST00000384700 70 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms