Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 RN7SL552P-201ENST00000462094 276 ntBASIC6.65□□□□□ -1.34
COPAP53621 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC6.65□□□□□ -1.34
COPAP53621 PFN1P8-201ENST00000497012 543 ntBASIC6.65□□□□□ -1.34
COPAP53621 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.65□□□□□ -1.34
COPAP53621 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.65□□□□□ -1.34
COPAP53621 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.65□□□□□ -1.34
COPAP53621 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.65□□□□□ -1.34
COPAP53621 AC008429.2-201ENST00000523057 864 ntBASIC6.65□□□□□ -1.34
COPAP53621 AL133399.1-201ENST00000527476 298 ntBASIC6.65□□□□□ -1.34
COPAP53621 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.65□□□□□ -1.34
COPAP53621 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.34
COPAP53621 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.65□□□□□ -1.34
COPAP53621 AC004232.1-201ENST00000571388 208 ntBASIC6.65□□□□□ -1.34
COPAP53621 AL078601.3-201ENST00000573303 535 ntBASIC6.65□□□□□ -1.34
COPAP53621 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.65□□□□□ -1.34
COPAP53621 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.65□□□□□ -1.34
COPAP53621 AC021766.1-201ENST00000624404 741 ntBASIC6.65□□□□□ -1.34
COPAP53621 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COPAP53621 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
COPAP53621 AC073365.1-203ENST00000641055 1992 ntBASIC6.65□□□□□ -1.34
COPAP53621 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COPAP53621 AC022613.3-201ENST00000560740 1346 ntBASIC6.65□□□□□ -1.35
COPAP53621 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.65□□□□□ -1.35
COPAP53621 AC074141.1-201ENST00000588129 2995 ntBASIC6.65□□□□□ -1.35
COPAP53621 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COPAP53621 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.65□□□□□ -1.35
COPAP53621 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
COPAP53621 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.35
COPAP53621 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
COPAP53621 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
COPAP53621 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.64□□□□□ -1.35
COPAP53621 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COPAP53621 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.64□□□□□ -1.35
COPAP53621 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COPAP53621 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 RNU11-6P-201ENST00000391127 133 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC007068.1-201ENST00000396690 844 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC003045.1-201ENST00000398779 713 ntBASIC6.64□□□□□ -1.35
COPAP53621 AL359092.1-201ENST00000417156 265 ntBASIC6.64□□□□□ -1.35
COPAP53621 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.64□□□□□ -1.35
COPAP53621 POU5F1P5-201ENST00000445059 658 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.64□□□□□ -1.35
COPAP53621 HSD3BP3-201ENST00000514706 994 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.64□□□□□ -1.35
COPAP53621 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC6.64□□□□□ -1.35
COPAP53621 OR4A46P-201ENST00000527255 933 ntBASIC6.64□□□□□ -1.35
COPAP53621 OR4R2P-201ENST00000530815 597 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC084121.1-201ENST00000533882 835 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.64□□□□□ -1.35
COPAP53621 AC005000.1-201ENST00000536192 288 ntBASIC6.64□□□□□ -1.35
COPAP53621 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
COPAP53621 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 AC106785.4-201ENST00000569492 412 ntBASIC6.64□□□□□ -1.35
COPAP53621 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 MIR4310-201ENST00000582950 57 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.64□□□□□ -1.35
COPAP53621 AC026898.1-201ENST00000586404 571 ntBASIC6.64□□□□□ -1.35
COPAP53621 OR4H6P-202ENST00000603819 340 ntBASIC6.64□□□□□ -1.35
COPAP53621 AL662797.2-201ENST00000607333 527 ntTSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 MIR6071-201ENST00000616741 78 ntBASIC6.64□□□□□ -1.35
COPAP53621 U1.41-201ENST00000617626 165 ntBASIC6.64□□□□□ -1.35
COPAP53621 AC018692.2-201ENST00000624130 348 ntBASIC6.64□□□□□ -1.35
COPAP53621 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
COPAP53621 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
COPAP53621 AC007485.2-201ENST00000623493 1667 ntBASIC6.64□□□□□ -1.35
COPAP53621 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
COPAP53621 CUL4AP1-201ENST00000514750 1863 ntBASIC6.64□□□□□ -1.35
COPAP53621 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
COPAP53621 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
COPAP53621 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.63□□□□□ -1.35
COPAP53621 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 FAM32BP-201ENST00000344033 333 ntBASIC6.63□□□□□ -1.35
COPAP53621 RNU6-1331P-201ENST00000363658 106 ntBASIC6.63□□□□□ -1.35
COPAP53621 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 RBBP4P5-201ENST00000398583 1266 ntBASIC6.63□□□□□ -1.35
COPAP53621 YWHAZP6-201ENST00000399764 738 ntBASIC6.63□□□□□ -1.35
COPAP53621 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.63□□□□□ -1.35
COPAP53621 AC002127.1-201ENST00000421305 225 ntBASIC6.63□□□□□ -1.35
COPAP53621 MTND4LP14-201ENST00000429447 288 ntBASIC6.63□□□□□ -1.35
COPAP53621 FTO-202ENST00000431610 707 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.63□□□□□ -1.35
COPAP53621 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
COPAP53621 TVP23CP1-201ENST00000450317 639 ntBASIC6.63□□□□□ -1.35
COPAP53621 AL139156.3-201ENST00000454802 394 ntBASIC6.63□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms