Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 MIR6780B-201ENST00000610307 79 ntBASIC6.74□□□□□ -1.33
COPB1P53618 AC068726.1-201ENST00000610993 341 ntBASIC6.74□□□□□ -1.33
COPB1P53618 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.74□□□□□ -1.33
COPB1P53618 AC022106.1-201ENST00000612834 766 ntBASIC6.74□□□□□ -1.33
COPB1P53618 AP003400.2-201ENST00000624036 666 ntBASIC6.74□□□□□ -1.33
COPB1P53618 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.74□□□□□ -1.33
COPB1P53618 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.74□□□□□ -1.33
COPB1P53618 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
COPB1P53618 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC6.73□□□□□ -1.33
COPB1P53618 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.73□□□□□ -1.33
COPB1P53618 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COPB1P53618 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COPB1P53618 SNORD1C-201ENST00000363315 78 ntBASIC6.73□□□□□ -1.33
COPB1P53618 RAB5CP1-201ENST00000395972 580 ntBASIC6.73□□□□□ -1.33
COPB1P53618 AC121334.1-201ENST00000396414 802 ntBASIC6.73□□□□□ -1.33
COPB1P53618 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 OR2W4P-201ENST00000406496 926 ntBASIC6.73□□□□□ -1.33
COPB1P53618 SNORA77.2-201ENST00000408571 112 ntBASIC6.73□□□□□ -1.33
COPB1P53618 RN7SKP146-201ENST00000410242 334 ntBASIC6.73□□□□□ -1.33
COPB1P53618 USP24P1-201ENST00000433802 779 ntBASIC6.73□□□□□ -1.33
COPB1P53618 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.73□□□□□ -1.33
COPB1P53618 snoU13.29-201ENST00000459370 104 ntBASIC6.73□□□□□ -1.33
COPB1P53618 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.73□□□□□ -1.33
COPB1P53618 RPS7P11-201ENST00000484240 586 ntBASIC6.73□□□□□ -1.33
COPB1P53618 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC6.73□□□□□ -1.33
COPB1P53618 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
COPB1P53618 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.73□□□□□ -1.33
COPB1P53618 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.73□□□□□ -1.33
COPB1P53618 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.73□□□□□ -1.33
COPB1P53618 HNRNPCP1-201ENST00000556181 766 ntBASIC6.73□□□□□ -1.33
COPB1P53618 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.73□□□□□ -1.33
COPB1P53618 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.73□□□□□ -1.33
COPB1P53618 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.73□□□□□ -1.33
COPB1P53618 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.73□□□□□ -1.33
COPB1P53618 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.73□□□□□ -1.33
COPB1P53618 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
COPB1P53618 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COPB1P53618 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.73□□□□□ -1.33
COPB1P53618 OFD1P17-201ENST00000437639 3018 ntBASIC6.73□□□□□ -1.33
COPB1P53618 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
COPB1P53618 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 CR383656.5-201ENST00000547616 1340 ntBASIC6.73□□□□□ -1.33
COPB1P53618 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
COPB1P53618 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPB1P53618 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPB1P53618 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.72□□□□□ -1.33
COPB1P53618 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COPB1P53618 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPB1P53618 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.72□□□□□ -1.33
COPB1P53618 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COPB1P53618 AL157702.1-201ENST00000398764 426 ntBASIC6.72□□□□□ -1.33
COPB1P53618 VIM2P-201ENST00000402383 1294 ntBASIC6.72□□□□□ -1.33
COPB1P53618 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 ELOCP6-201ENST00000429066 328 ntBASIC6.72□□□□□ -1.33
COPB1P53618 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.72□□□□□ -1.33
COPB1P53618 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC6.72□□□□□ -1.33
COPB1P53618 RPS18P1-201ENST00000447840 458 ntBASIC6.72□□□□□ -1.33
COPB1P53618 AL162739.1-201ENST00000450606 307 ntBASIC6.72□□□□□ -1.33
COPB1P53618 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
COPB1P53618 AL133351.3-201ENST00000454998 193 ntBASIC6.72□□□□□ -1.33
COPB1P53618 ELOCP12-201ENST00000458706 328 ntBASIC6.72□□□□□ -1.33
COPB1P53618 RN7SL352P-201ENST00000466002 277 ntBASIC6.72□□□□□ -1.33
COPB1P53618 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.72□□□□□ -1.33
COPB1P53618 AC093816.1-201ENST00000515076 913 ntBASIC6.72□□□□□ -1.33
COPB1P53618 SNORD116-30-201ENST00000516468 85 ntBASIC6.72□□□□□ -1.33
COPB1P53618 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.72□□□□□ -1.33
COPB1P53618 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.72□□□□□ -1.33
COPB1P53618 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.72□□□□□ -1.33
COPB1P53618 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.72□□□□□ -1.33
COPB1P53618 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.72□□□□□ -1.33
COPB1P53618 AP001267.4-201ENST00000602598 545 ntBASIC6.72□□□□□ -1.33
COPB1P53618 AC141002.1-201ENST00000607025 279 ntBASIC6.72□□□□□ -1.33
COPB1P53618 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.72□□□□□ -1.33
COPB1P53618 SNORA74.4-201ENST00000607595 199 ntBASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms