Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 AC022415.1-202ENST00000486612 523 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC021146.11-201ENST00000503319 491 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.83□□□□□ -1.48
GTF2A1P52655 SCARNA18.2-201ENST00000516882 84 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC5.83□□□□□ -1.48
GTF2A1P52655 IGLC4-201ENST00000517690 248 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 SSU72P6-201ENST00000532644 488 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 LINC00678-202ENST00000534757 798 ntTSL 3 BASIC5.83□□□□□ -1.48
GTF2A1P52655 AL162632.2-201ENST00000553933 399 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
GTF2A1P52655 MIR4262-201ENST00000578394 54 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.83□□□□□ -1.48
GTF2A1P52655 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.83□□□□□ -1.48
GTF2A1P52655 AL035417.2-201ENST00000603887 796 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC092960.1-201ENST00000604762 351 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AL592504.1-201ENST00000605319 439 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC012640.3-201ENST00000607847 430 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC013489.3-201ENST00000623274 517 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 AC008626.2-201ENST00000624425 248 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 KCNJ10-204ENST00000637644 1239 ntTSL 5 BASIC5.83□□□□□ -1.48
GTF2A1P52655 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
GTF2A1P52655 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
GTF2A1P52655 AC104964.3-201ENST00000606115 2860 ntBASIC5.83□□□□□ -1.48
GTF2A1P52655 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
GTF2A1P52655 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
GTF2A1P52655 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
GTF2A1P52655 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 AL513548.1-201ENST00000562904 1724 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 NDFIP2-206ENST00000620924 2324 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
GTF2A1P52655 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 AL034370.1-201ENST00000397254 1590 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC5.82□□□□□ -1.48
GTF2A1P52655 TRMT13-203ENST00000370143 476 ntTSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 BMS1P3-201ENST00000372011 932 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AL359643.1-201ENST00000404109 423 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 RN7SKP236-201ENST00000410635 284 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 SNX18P13-201ENST00000412442 529 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 AL133482.1-201ENST00000415988 498 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AL357632.1-201ENST00000426688 643 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.82□□□□□ -1.48
GTF2A1P52655 NIP7P1-201ENST00000433227 512 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 TMX2P1-201ENST00000436507 708 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 AL359265.1-201ENST00000440296 795 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 AL354714.5-201ENST00000450131 590 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 AL096803.1-201ENST00000456921 1021 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.82□□□□□ -1.48
GTF2A1P52655 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 SSR1-206ENST00000479365 1118 ntTSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC132192.1-201ENST00000531111 597 ntTSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.82□□□□□ -1.48
GTF2A1P52655 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.82□□□□□ -1.48
GTF2A1P52655 LALBA-202ENST00000549817 1243 ntTSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 PPIAP6-201ENST00000557078 499 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 AC090527.1-201ENST00000557965 431 ntTSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 RN7SL270P-201ENST00000579643 281 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC005154.6-201ENST00000598361 687 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
GTF2A1P52655 ZNF473-209ENST00000601364 603 ntTSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC099777.1-201ENST00000603779 1070 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 AL590032.1-201ENST00000604920 252 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 ZNF710-AS1-202ENST00000620791 2133 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
GTF2A1P52655 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 ZNF806-201ENST00000438300 1774 ntBASIC5.82□□□□□ -1.48
GTF2A1P52655 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
GTF2A1P52655 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.81□□□□□ -1.48
GTF2A1P52655 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
GTF2A1P52655 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
GTF2A1P52655 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC5.81□□□□□ -1.48
GTF2A1P52655 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GTF2A1P52655 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC5.81□□□□□ -1.48
GTF2A1P52655 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
GTF2A1P52655 RNA5SP301-201ENST00000362537 121 ntBASIC5.81□□□□□ -1.48
GTF2A1P52655 RNA5SP114-201ENST00000363780 113 ntBASIC5.81□□□□□ -1.48
GTF2A1P52655 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
GTF2A1P52655 RN7SKP296-201ENST00000411185 341 ntBASIC5.81□□□□□ -1.48
GTF2A1P52655 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.81□□□□□ -1.48
GTF2A1P52655 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms