Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.35□□□□□ -1.55
CX3CR1P49238 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 CDY11P-201ENST00000447168 1651 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CX3CR1P49238 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CX3CR1P49238 RNA5SP375-201ENST00000362975 119 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AL121977.1-201ENST00000401636 979 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 SETP9-201ENST00000423837 832 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.35□□□□□ -1.55
CX3CR1P49238 IGLV3-4-201ENST00000432300 244 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 OR3D1P-201ENST00000438288 955 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AL645936.1-201ENST00000441979 518 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC124945.1-201ENST00000485133 188 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.35□□□□□ -1.55
CX3CR1P49238 TPM3P3-201ENST00000521343 354 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.35□□□□□ -1.55
CX3CR1P49238 MIR3157-201ENST00000578688 85 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC012368.3-201ENST00000604190 219 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AC141002.1-201ENST00000607025 279 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.35□□□□□ -1.55
CX3CR1P49238 RN7SL261P-201ENST00000613441 282 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 MIR6774-201ENST00000614651 70 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.35□□□□□ -1.55
CX3CR1P49238 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.35□□□□□ -1.55
CX3CR1P49238 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
CX3CR1P49238 AC140134.1-201ENST00000511830 3544 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 AP000432.2-201ENST00000624164 2048 ntBASIC5.35□□□□□ -1.55
CX3CR1P49238 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
CX3CR1P49238 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CX3CR1P49238 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 NLRP3P1-201ENST00000622303 1785 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AL355488.2-201ENST00000609909 2850 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AL355834.1-201ENST00000556602 3965 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC018628.1-201ENST00000624147 3819 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AC232271.1-201ENST00000602455 2715 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CX3CR1P49238 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CR1P49238 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CR1P49238 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CX3CR1P49238 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 RPS7P8-201ENST00000418311 581 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC092651.1-201ENST00000426110 312 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AL590399.2-201ENST00000427536 309 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 AL365220.1-201ENST00000432923 399 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC013403.1-201ENST00000436954 263 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 RPL5P10-201ENST00000445207 894 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.34□□□□□ -1.55
CX3CR1P49238 REG1CP-206ENST00000447469 496 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 RPL23AP60-201ENST00000450011 454 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CR1P49238 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC138517.1-201ENST00000515724 568 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CR1P49238 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 NPM1P5-201ENST00000557228 838 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CR1P49238 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AC009120.7-201ENST00000623452 780 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.34□□□□□ -1.55
CX3CR1P49238 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC000095.2-202ENST00000637415 154 ntBASIC5.34□□□□□ -1.55
CX3CR1P49238 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.34□□□□□ -1.55
CX3CR1P49238 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.34□□□□□ -1.55
CX3CR1P49238 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
CX3CR1P49238 AL137141.1-201ENST00000624622 4836 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms