Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 LINC02324-201ENST00000531609 1442 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 CD96-201ENST00000283285 4324 ntAPPRIS P4 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 CREM-216ENST00000429130 1476 ntTSL 5 BASIC6.13□□□□□ -1.43
CD40P25942 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.13□□□□□ -1.43
CD40P25942 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
CD40P25942 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 AC018992.1-201ENST00000523778 2149 ntBASIC6.13□□□□□ -1.43
CD40P25942 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CD40P25942 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
CD40P25942 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 LINC00861-201ENST00000500989 5330 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 RNASE9-209ENST00000557068 2703 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 CDC7-203ENST00000428239 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 CCDC129-205ENST00000451887 3611 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 SLC4A4-204ENST00000425175 7596 ntTSL 5 BASIC6.12□□□□□ -1.43
CD40P25942 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC6.12□□□□□ -1.43
CD40P25942 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CD40P25942 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 METTL21EP-201ENST00000298105 713 ntBASIC6.12□□□□□ -1.43
CD40P25942 FAM133CP-201ENST00000332869 704 ntBASIC6.12□□□□□ -1.43
CD40P25942 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CD40P25942 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 RNU6-413P-201ENST00000384115 107 ntBASIC6.12□□□□□ -1.43
CD40P25942 RNU6-549P-201ENST00000384433 107 ntBASIC6.12□□□□□ -1.43
CD40P25942 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 ERHP2-201ENST00000402323 299 ntBASIC6.12□□□□□ -1.43
CD40P25942 LYPLA1P3-201ENST00000402650 695 ntBASIC6.12□□□□□ -1.43
CD40P25942 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 AP000357.1-201ENST00000409926 1165 ntBASIC6.12□□□□□ -1.43
CD40P25942 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 CHCHD3P1-201ENST00000425516 676 ntBASIC6.12□□□□□ -1.43
CD40P25942 DPY19L1P2-201ENST00000426647 915 ntBASIC6.12□□□□□ -1.43
CD40P25942 RPL23AP4-201ENST00000427757 463 ntBASIC6.12□□□□□ -1.43
CD40P25942 FTH1P20-201ENST00000434913 548 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.12□□□□□ -1.43
CD40P25942 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC6.12□□□□□ -1.43
CD40P25942 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 MTND1P29-201ENST00000448112 647 ntBASIC6.12□□□□□ -1.43
CD40P25942 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.12□□□□□ -1.43
CD40P25942 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 NPM1P13-201ENST00000452663 865 ntBASIC6.12□□□□□ -1.43
CD40P25942 CDC42P1-201ENST00000456658 548 ntBASIC6.12□□□□□ -1.43
CD40P25942 RN7SL870P-201ENST00000460111 296 ntBASIC6.12□□□□□ -1.43
CD40P25942 POMP-202ENST00000460403 1428 ntTSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 AC021205.1-201ENST00000468797 348 ntBASIC6.12□□□□□ -1.43
CD40P25942 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 AC126121.1-201ENST00000482313 553 ntBASIC6.12□□□□□ -1.43
CD40P25942 RPL9P15-201ENST00000491096 532 ntBASIC6.12□□□□□ -1.43
CD40P25942 HSPD1P1-201ENST00000503199 1726 ntBASIC6.12□□□□□ -1.43
CD40P25942 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 AC146944.3-201ENST00000509969 371 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 LRRC37A15P-201ENST00000514785 1355 ntBASIC6.12□□□□□ -1.43
CD40P25942 PRELID3BP4-201ENST00000515476 571 ntBASIC6.12□□□□□ -1.43
CD40P25942 RNU6-1129P-201ENST00000515964 104 ntBASIC6.12□□□□□ -1.43
CD40P25942 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 OR4A6P-201ENST00000534364 970 ntBASIC6.12□□□□□ -1.43
CD40P25942 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 AC025260.1-201ENST00000548858 430 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC6.12□□□□□ -1.43
CD40P25942 AL358913.2-201ENST00000553881 1548 ntBASIC6.12□□□□□ -1.43
CD40P25942 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 AC026458.1-201ENST00000564330 438 ntBASIC6.12□□□□□ -1.43
CD40P25942 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.12□□□□□ -1.43
CD40P25942 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 RPS27AP19-201ENST00000597285 458 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC005261.4-201ENST00000600047 1385 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC021749.1-201ENST00000604322 607 ntBASIC6.12□□□□□ -1.43
CD40P25942 DPRXP5-201ENST00000604662 539 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC018638.7-201ENST00000605836 1114 ntBASIC6.12□□□□□ -1.43
CD40P25942 AL021707.7-201ENST00000607991 416 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC063962.1-201ENST00000608199 521 ntBASIC6.12□□□□□ -1.43
CD40P25942 LINC02019-202ENST00000609204 845 ntTSL 2 BASIC6.12□□□□□ -1.43
CD40P25942 VIS1.1-201ENST00000610517 203 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC130456.6-201ENST00000623745 765 ntBASIC6.12□□□□□ -1.43
CD40P25942 AC023818.2-201ENST00000623817 2304 ntBASIC6.12□□□□□ -1.43
CD40P25942 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CD40P25942 AC099654.15-201ENST00000639802 509 ntBASIC6.12□□□□□ -1.43
CD40P25942 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CD40P25942 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms