Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RGS5-220ENST00000528689 566 ntTSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC8.08□□□□□ -1.12
ERCC3P19447 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 AC091515.1-201ENST00000548110 679 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 MIR3157-201ENST00000578688 85 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 SNORD39.2-201ENST00000579995 76 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 CCDC58P3-201ENST00000590792 430 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC8.08□□□□□ -1.12
ERCC3P19447 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC8.08□□□□□ -1.12
ERCC3P19447 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC8.08□□□□□ -1.12
ERCC3P19447 MIR6823-201ENST00000622118 61 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 AC005858.3-201ENST00000624756 589 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.08□□□□□ -1.12
ERCC3P19447 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 POGZ-204ENST00000392723 6152 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 AL358913.2-201ENST00000553881 1548 ntBASIC8.08□□□□□ -1.12
ERCC3P19447 PDE11A-212ENST00000358450 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
ERCC3P19447 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 BCL2L14-211ENST00000586576 1927 ntTSL 5 BASIC8.07□□□□□ -1.12
ERCC3P19447 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
ERCC3P19447 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 AL359263.1-201ENST00000441188 2796 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC8.07□□□□□ -1.12
ERCC3P19447 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
ERCC3P19447 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC8.07□□□□□ -1.12
ERCC3P19447 INTS7-204ENST00000440600 3136 ntTSL 2 BASIC8.07□□□□□ -1.12
ERCC3P19447 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC8.07□□□□□ -1.12
ERCC3P19447 UBE2Q2P1-202ENST00000354771 883 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
ERCC3P19447 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC8.07□□□□□ -1.12
ERCC3P19447 SNORD116-2-201ENST00000384274 95 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 RNU6-636P-201ENST00000384598 107 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 SNORD116-6-201ENST00000384711 96 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AL359715.1-201ENST00000404330 555 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 RPS24P7-201ENST00000416921 246 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC8.07□□□□□ -1.12
ERCC3P19447 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC8.07□□□□□ -1.12
ERCC3P19447 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 AC000089.1-201ENST00000424559 801 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC8.07□□□□□ -1.12
ERCC3P19447 GTF2IP14-201ENST00000441415 586 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 GAPDHP16-201ENST00000448152 962 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AL354714.5-201ENST00000450131 590 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AL445991.1-201ENST00000450381 475 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 RPL7AP71-201ENST00000451120 739 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC234771.3-201ENST00000454984 622 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 GTF2IP12-201ENST00000456547 356 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC236972.4-201ENST00000458091 963 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 GLRXP3-201ENST00000470810 321 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AP000805.1-201ENST00000471604 784 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 RPS3AP49-201ENST00000472161 790 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC8.07□□□□□ -1.12
ERCC3P19447 AC108120.2-201ENST00000512973 294 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC093878.1-201ENST00000515630 432 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC8.07□□□□□ -1.12
ERCC3P19447 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC8.07□□□□□ -1.12
ERCC3P19447 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC8.07□□□□□ -1.12
ERCC3P19447 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC8.07□□□□□ -1.12
ERCC3P19447 AC244034.2-201ENST00000562504 509 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC092718.4-201ENST00000566639 716 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC8.07□□□□□ -1.12
ERCC3P19447 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.07□□□□□ -1.12
ERCC3P19447 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.07□□□□□ -1.12
ERCC3P19447 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC8.07□□□□□ -1.12
ERCC3P19447 AL355333.1-201ENST00000605632 279 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AL390877.1-201ENST00000605704 214 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC8.07□□□□□ -1.12
ERCC3P19447 AC073569.3-201ENST00000619055 682 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC011815.3-201ENST00000624194 473 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AC079416.3-201ENST00000624479 549 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 AL390318.1-201ENST00000624564 687 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 OR10A2-202ENST00000641461 5390 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
ERCC3P19447 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 AC102941.1-201ENST00000567616 1537 ntBASIC8.07□□□□□ -1.12
ERCC3P19447 IFNA13-202ENST00000610660 1539 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
ERCC3P19447 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 ST18-201ENST00000276480 6187 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
ERCC3P19447 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
ERCC3P19447 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC8.06□□□□□ -1.12
ERCC3P19447 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms