Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 MITF-203ENST00000328528 4680 ntTSL 5 BASIC7.82□□□□□ -1.16
HOXD8P13378 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HOXD8P13378 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HOXD8P13378 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
HOXD8P13378 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
HOXD8P13378 MLIP-201ENST00000274897 1815 ntAPPRIS P3 TSL 2 BASIC7.82□□□□□ -1.16
HOXD8P13378 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.82□□□□□ -1.16
HOXD8P13378 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
HOXD8P13378 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC7.82□□□□□ -1.16
HOXD8P13378 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
HOXD8P13378 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 MAP4K4-219ENST00000625522 7458 ntAPPRIS P5 TSL 5 BASIC7.81□□□□□ -1.16
HOXD8P13378 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 AL590065.1-201ENST00000603371 4774 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 VTI1A-202ENST00000432306 1738 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 ADH6-203ENST00000394899 2802 ntAPPRIS ALT1 TSL 2 BASIC7.81□□□□□ -1.16
HOXD8P13378 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
HOXD8P13378 FAM217B-202ENST00000360816 5036 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 LINC00649-203ENST00000427447 9124 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 FAR2-202ENST00000536681 3616 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 AC124045.1-201ENST00000606008 1953 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 BRD8-201ENST00000230901 3198 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
HOXD8P13378 SNORD56.4-201ENST00000363883 71 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
HOXD8P13378 DEFB121-202ENST00000376314 389 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 AC019178.1-201ENST00000392337 440 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC092638.1-201ENST00000411966 1275 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 NPM1P36-201ENST00000415681 835 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXD8P13378 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXD8P13378 AL139415.2-201ENST00000431968 163 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXD8P13378 AL354941.1-201ENST00000438600 464 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 MTCYBP34-201ENST00000439552 670 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXD8P13378 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXD8P13378 AL627224.1-201ENST00000448334 444 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 RN7SL393P-201ENST00000463588 296 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXD8P13378 RNA5SP303-201ENST00000516192 130 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 RNA5SP318-201ENST00000516352 92 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXD8P13378 IGLVVII-41-1-201ENST00000518405 151 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 OR7E154P-201ENST00000525174 932 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXD8P13378 OR4A40P-201ENST00000533878 948 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXD8P13378 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC7.81□□□□□ -1.16
HOXD8P13378 CCNG2P1-201ENST00000549521 1000 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AL512347.1-201ENST00000566420 503 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 NDUFA5P11-201ENST00000567995 343 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC7.81□□□□□ -1.16
HOXD8P13378 ACTG1P15-201ENST00000570019 1063 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 RN7SL66P-201ENST00000582099 264 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 RPL7AP69-201ENST00000595306 806 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AL356986.1-201ENST00000604085 341 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC021749.1-201ENST00000604322 607 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.81□□□□□ -1.16
HOXD8P13378 AC019080.5-201ENST00000624891 757 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXD8P13378 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 MAPK10-380ENST00000642015 3137 ntAPPRIS P2 BASIC7.81□□□□□ -1.16
HOXD8P13378 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXD8P13378 BMX-203ENST00000357607 2598 ntAPPRIS P1 TSL 2 BASIC7.81□□□□□ -1.16
HOXD8P13378 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.81□□□□□ -1.16
HOXD8P13378 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 DDX43P1-201ENST00000510713 1763 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC7.81□□□□□ -1.16
HOXD8P13378 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 KRT73-AS1-203ENST00000552364 3808 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXD8P13378 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC7.81□□□□□ -1.16
HOXD8P13378 MKI67P1-201ENST00000604297 1460 ntBASIC7.81□□□□□ -1.16
HOXD8P13378 AC009690.2-201ENST00000570175 3148 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
HOXD8P13378 GRIK1-202ENST00000389124 2712 ntTSL 5 BASIC7.8□□□□□ -1.16
HOXD8P13378 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
HOXD8P13378 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXD8P13378 RUNX1T1-249ENST00000613886 7401 ntAPPRIS ALT1 TSL 5 BASIC7.8□□□□□ -1.16
HOXD8P13378 HEMGN-201ENST00000259456 2192 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXD8P13378 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC7.8□□□□□ -1.16
HOXD8P13378 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXD8P13378 FANCL-202ENST00000402135 1698 ntAPPRIS ALT1 TSL 2 BASIC7.8□□□□□ -1.16
HOXD8P13378 CYFIP2-221ENST00000618329 4256 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXD8P13378 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXD8P13378 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
HOXD8P13378 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.8□□□□□ -1.16
HOXD8P13378 ZEB2-232ENST00000636026 5172 ntTSL 5 BASIC7.8□□□□□ -1.16
HOXD8P13378 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
HOXD8P13378 RNU6-252P-201ENST00000363232 107 ntBASIC7.8□□□□□ -1.16
HOXD8P13378 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC7.8□□□□□ -1.16
HOXD8P13378 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
HOXD8P13378 Y_RNA.560-201ENST00000384689 102 ntBASIC7.8□□□□□ -1.16
HOXD8P13378 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
HOXD8P13378 MCTS2P-201ENST00000394552 546 ntBASIC7.8□□□□□ -1.16
HOXD8P13378 OR8G2P-201ENST00000412796 908 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms