Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 MIR187-201ENST00000385062 109 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CXCL1P09341 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 CTSL3P-202ENST00000412179 788 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 AC211486.3-201ENST00000412694 621 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 MEG8-201ENST00000414488 800 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 PTCD2P2-201ENST00000415579 1095 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 CHCHD4P5-201ENST00000436684 427 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC016908.1-201ENST00000442571 1219 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 RANP2-201ENST00000456833 229 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 AC069304.1-201ENST00000491593 704 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 PFN2-213ENST00000494827 793 ntTSL 4 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 RN7SKP288-201ENST00000516227 268 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 IGHV4-55-201ENST00000520889 368 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 LINC01559-203ENST00000531049 683 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC4.6□□□□□ -1.67
CXCL1P09341 RPL3P13-201ENST00000550415 216 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 GNG2-203ENST00000553432 577 ntTSL 4 BASIC4.6□□□□□ -1.67
CXCL1P09341 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 STARD6-204ENST00000584040 660 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 AL049840.6-201ENST00000604583 345 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 FXYD6P1-201ENST00000604857 285 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 RNASE11-211ENST00000620912 883 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.6□□□□□ -1.67
CXCL1P09341 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CXCL1P09341 RGS20-207ENST00000522225 1559 ntTSL 2 BASIC4.6□□□□□ -1.67
CXCL1P09341 AC063923.1-201ENST00000478982 1619 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 AL078595.2-201ENST00000605309 1780 ntBASIC4.6□□□□□ -1.67
CXCL1P09341 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC4.6□□□□□ -1.67
CXCL1P09341 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 RN7SKP74-201ENST00000362849 309 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 AC121334.1-201ENST00000396414 802 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 SNORA11D-201ENST00000408548 128 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 SNORA11E-201ENST00000408778 128 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AL133482.1-201ENST00000415988 498 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC017078.1-201ENST00000416146 368 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC091492.1-201ENST00000419844 272 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC009303.1-201ENST00000426307 352 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 PSMD8P1-201ENST00000436275 769 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL1P09341 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL1P09341 RPL23AP60-201ENST00000450011 454 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 PRELID1P3-201ENST00000450055 643 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 AC022080.2-201ENST00000452932 533 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 ST13P21-201ENST00000453250 1098 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC099670.1-201ENST00000455141 783 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC4.59□□□□□ -1.67
CXCL1P09341 RN7SL456P-201ENST00000469290 295 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 RN7SL643P-201ENST00000471845 291 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 AC079080.1-201ENST00000479841 822 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 RN7SL714P-201ENST00000487050 298 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CXCL1P09341 ENPP7P11-201ENST00000505915 627 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL1P09341 AC097460.2-201ENST00000511857 741 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 RN7SKP196-201ENST00000516267 345 ntBASIC4.59□□□□□ -1.67
CXCL1P09341 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.59□□□□□ -1.67
CXCL1P09341 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.59□□□□□ -1.67
CXCL1P09341 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms