Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
SSX4O60224 ODF3-202ENST00000342593 386 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX4O60224 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX4O60224 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AL607077.1-201ENST00000401718 499 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AL590635.1-201ENST00000406314 586 ntBASIC5.72□□□□□ -1.49
SSX4O60224 MIR1275-201ENST00000408770 80 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX4O60224 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 GPN3P1-201ENST00000423883 535 ntBASIC5.72□□□□□ -1.49
SSX4O60224 TRIM60P13-201ENST00000432350 1283 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 RN7SL187P-201ENST00000495587 303 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 MTND2P31-201ENST00000512602 616 ntBASIC5.72□□□□□ -1.49
SSX4O60224 SNORA70.17-201ENST00000516449 133 ntBASIC5.72□□□□□ -1.49
SSX4O60224 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 AC011853.1-201ENST00000518911 454 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 AC087272.1-201ENST00000523624 533 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX4O60224 HMGN2P47-201ENST00000559378 272 ntBASIC5.72□□□□□ -1.49
SSX4O60224 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX4O60224 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC5.72□□□□□ -1.49
SSX4O60224 HNRNPA3P9-201ENST00000604913 979 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AL035410.2-201ENST00000604963 864 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX4O60224 AC093388.1-201ENST00000609166 430 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AC004241.2-201ENST00000614562 444 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AL354696.1-201ENST00000614652 497 ntBASIC5.72□□□□□ -1.49
SSX4O60224 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 AL591926.1-201ENST00000620542 217 ntBASIC5.72□□□□□ -1.49
SSX4O60224 AC018628.1-201ENST00000624147 3819 ntBASIC5.72□□□□□ -1.49
SSX4O60224 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SSX4O60224 AC061999.1-201ENST00000624454 177 ntBASIC5.72□□□□□ -1.49
SSX4O60224 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX4O60224 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.72□□□□□ -1.49
SSX4O60224 AC022164.1-201ENST00000568767 2673 ntBASIC5.72□□□□□ -1.49
SSX4O60224 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
SSX4O60224 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
SSX4O60224 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
SSX4O60224 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 CASC19-260ENST00000641828 2001 ntBASIC5.72□□□□□ -1.49
SSX4O60224 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SSX4O60224 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.72□□□□□ -1.49
SSX4O60224 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SSX4O60224 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SSX4O60224 AC005261.2-201ENST00000593427 4258 ntBASIC5.71□□□□□ -1.49
SSX4O60224 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SSX4O60224 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SSX4O60224 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.71□□□□□ -1.49
SSX4O60224 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.49
SSX4O60224 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
SSX4O60224 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.71□□□□□ -1.49
SSX4O60224 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
SSX4O60224 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX4O60224 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SSX4O60224 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX4O60224 AL589826.1-201ENST00000340697 249 ntBASIC5.71□□□□□ -1.5
SSX4O60224 RNA5SP485-201ENST00000365053 119 ntBASIC5.71□□□□□ -1.5
SSX4O60224 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX4O60224 RN7SKP129-201ENST00000410288 299 ntBASIC5.71□□□□□ -1.5
SSX4O60224 RNU6-564P-201ENST00000410983 104 ntBASIC5.71□□□□□ -1.5
SSX4O60224 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX4O60224 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX4O60224 AC017078.1-201ENST00000416146 368 ntBASIC5.71□□□□□ -1.5
SSX4O60224 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SSX4O60224 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SSX4O60224 AC092106.2-201ENST00000436597 487 ntBASIC5.71□□□□□ -1.5
SSX4O60224 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.71□□□□□ -1.5
SSX4O60224 C1DP3-201ENST00000455013 423 ntBASIC5.71□□□□□ -1.5
SSX4O60224 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.71□□□□□ -1.5
SSX4O60224 CTSLP6-201ENST00000458273 1002 ntBASIC5.71□□□□□ -1.5
SSX4O60224 AC104849.1-201ENST00000462623 405 ntBASIC5.71□□□□□ -1.5
SSX4O60224 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.71□□□□□ -1.5
SSX4O60224 AC016687.1-201ENST00000482574 353 ntBASIC5.71□□□□□ -1.5
SSX4O60224 RPL7AP23-201ENST00000482625 776 ntBASIC5.71□□□□□ -1.5
SSX4O60224 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.71□□□□□ -1.5
SSX4O60224 AC113367.2-201ENST00000505749 160 ntBASIC5.71□□□□□ -1.5
SSX4O60224 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SSX4O60224 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.71□□□□□ -1.5
SSX4O60224 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX4O60224 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.71□□□□□ -1.5
SSX4O60224 AC124891.1-201ENST00000536322 519 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms