Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.09□□□□□ -1.59
SDCBPO00560 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.09□□□□□ -1.59
SDCBPO00560 MIR3157-201ENST00000578688 85 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC141002.1-201ENST00000607025 279 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AL591167.1-201ENST00000607321 456 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC005899.6-201ENST00000620729 297 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 AL138693.1-201ENST00000622219 129 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 AC016583.1-201ENST00000624221 2431 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SDCBPO00560 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
SDCBPO00560 AC005224.3-201ENST00000584683 2140 ntBASIC5.09□□□□□ -1.59
SDCBPO00560 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SDCBPO00560 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.59
SDCBPO00560 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
SDCBPO00560 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.09□□□□□ -1.6
SDCBPO00560 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
SDCBPO00560 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
SDCBPO00560 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
SDCBPO00560 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SDCBPO00560 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SDCBPO00560 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.08□□□□□ -1.6
SDCBPO00560 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SDCBPO00560 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC5.08□□□□□ -1.6
SDCBPO00560 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SDCBPO00560 AL157702.1-201ENST00000398764 426 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 RN7SKP38-201ENST00000410782 309 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.08□□□□□ -1.6
SDCBPO00560 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.08□□□□□ -1.6
SDCBPO00560 AC094019.1-201ENST00000434678 472 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 AC010086.1-201ENST00000437359 1052 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 OR3D1P-201ENST00000438288 955 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.08□□□□□ -1.6
SDCBPO00560 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 HIGD1AP16-201ENST00000450986 258 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 RARRES2P3-201ENST00000457739 473 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 RPL23AP40-201ENST00000487630 390 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 SNRPCP11-201ENST00000492453 205 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 RN7SL104P-201ENST00000498686 293 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 CCDC11P1-201ENST00000503137 1162 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.08□□□□□ -1.6
SDCBPO00560 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 AC093815.1-201ENST00000508637 280 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.08□□□□□ -1.6
SDCBPO00560 snoU109.5-201ENST00000516231 132 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 SNORA74.1-201ENST00000516320 180 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.08□□□□□ -1.6
SDCBPO00560 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
SDCBPO00560 NDUFB9P1-201ENST00000604683 510 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
SDCBPO00560 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
SDCBPO00560 NCOA4P2-201ENST00000340589 1813 ntBASIC5.08□□□□□ -1.6
SDCBPO00560 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.08□□□□□ -1.6
SDCBPO00560 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
SDCBPO00560 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC5.07□□□□□ -1.6
SDCBPO00560 CASC19-260ENST00000641828 2001 ntBASIC5.07□□□□□ -1.6
SDCBPO00560 AC007998.4-201ENST00000612496 2533 ntBASIC5.07□□□□□ -1.6
SDCBPO00560 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.07□□□□□ -1.6
SDCBPO00560 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
SDCBPO00560 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
SDCBPO00560 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SDCBPO00560 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
SDCBPO00560 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
SDCBPO00560 LINC01613-201ENST00000561476 2780 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms