Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC141002.1-201ENST00000607025 279 ntBASIC6.52□□□□□ -1.37
O00370 AC093388.1-201ENST00000609166 430 ntBASIC6.52□□□□□ -1.37
O00370 AL683826.1-201ENST00000624104 627 ntBASIC6.52□□□□□ -1.37
O00370 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 AC022325.1-201ENST00000502748 2199 ntBASIC6.52□□□□□ -1.37
O00370 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 AC092070.2-203ENST00000598377 3644 ntBASIC6.52□□□□□ -1.37
O00370 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.52□□□□□ -1.37
O00370 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.52□□□□□ -1.37
O00370 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
O00370 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.51□□□□□ -1.37
O00370 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.51□□□□□ -1.37
O00370 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
O00370 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
O00370 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
O00370 GCNT1P4-201ENST00000404096 329 ntBASIC6.51□□□□□ -1.37
O00370 AL121835.1-201ENST00000404250 354 ntBASIC6.51□□□□□ -1.37
O00370 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.51□□□□□ -1.37
O00370 SMC4P1-201ENST00000414479 527 ntBASIC6.51□□□□□ -1.37
O00370 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.51□□□□□ -1.37
O00370 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.51□□□□□ -1.37
O00370 RPL5P7-201ENST00000444235 813 ntBASIC6.51□□□□□ -1.37
O00370 AC068491.1-201ENST00000449539 1241 ntBASIC6.51□□□□□ -1.37
O00370 HMGB1P7-201ENST00000450921 612 ntBASIC6.51□□□□□ -1.37
O00370 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.51□□□□□ -1.37
O00370 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 AC021006.1-201ENST00000489849 553 ntBASIC6.51□□□□□ -1.37
O00370 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.51□□□□□ -1.37
O00370 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.51□□□□□ -1.37
O00370 AC008945.1-201ENST00000505144 499 ntBASIC6.51□□□□□ -1.37
O00370 CR383658.1-201ENST00000514609 734 ntBASIC6.51□□□□□ -1.37
O00370 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.51□□□□□ -1.37
O00370 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC6.51□□□□□ -1.37
O00370 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.51□□□□□ -1.37
O00370 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
O00370 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.51□□□□□ -1.37
O00370 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.51□□□□□ -1.37
O00370 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 AP001267.4-201ENST00000602598 545 ntBASIC6.51□□□□□ -1.37
O00370 AC027334.1-201ENST00000603257 310 ntBASIC6.51□□□□□ -1.37
O00370 AC073389.3-201ENST00000609434 935 ntBASIC6.51□□□□□ -1.37
O00370 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.51□□□□□ -1.37
O00370 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC6.51□□□□□ -1.37
O00370 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
O00370 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
O00370 AL591926.1-201ENST00000620542 217 ntBASIC6.51□□□□□ -1.37
O00370 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.51□□□□□ -1.37
O00370 AC009950.2-201ENST00000636548 183 ntBASIC6.51□□□□□ -1.37
O00370 CASC19-274ENST00000642018 970 ntBASIC6.51□□□□□ -1.37
O00370 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.51□□□□□ -1.37
O00370 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
O00370 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.51□□□□□ -1.37
O00370 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
O00370 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
O00370 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
O00370 WDR95P-201ENST00000425638 1542 ntBASIC6.5□□□□□ -1.37
O00370 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
O00370 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
O00370 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
O00370 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
O00370 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
O00370 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
O00370 RN7SKP151-201ENST00000410230 316 ntBASIC6.5□□□□□ -1.37
O00370 RNA5SP156-201ENST00000410250 110 ntBASIC6.5□□□□□ -1.37
O00370 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.5□□□□□ -1.37
O00370 AL355994.1-201ENST00000424379 260 ntBASIC6.5□□□□□ -1.37
O00370 AC130360.1-201ENST00000425489 1117 ntBASIC6.5□□□□□ -1.37
O00370 AKR1B10P1-201ENST00000425765 942 ntBASIC6.5□□□□□ -1.37
O00370 AC013410.1-201ENST00000436223 1232 ntBASIC6.5□□□□□ -1.37
O00370 AC023141.3-201ENST00000436698 278 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms