Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.85□□□□□ -1.47
SLC28A1O00337 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 RPL11P4-201ENST00000332269 436 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 RNU105B-201ENST00000364478 208 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 PRELID1P1-201ENST00000403549 660 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 MYL6P5-201ENST00000412707 459 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AL645936.1-201ENST00000441979 518 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.85□□□□□ -1.47
SLC28A1O00337 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 OR52I1-201ENST00000450052 1050 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 RPL34P33-201ENST00000486062 334 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.85□□□□□ -1.47
SLC28A1O00337 SNORA74.1-201ENST00000516320 180 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 AC244502.2-201ENST00000543361 851 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 HNRNPCP1-201ENST00000556181 766 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AC063977.7-201ENST00000594454 337 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 GAPDHP41-201ENST00000613707 975 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 AC211486.4-201ENST00000621495 113 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 AP001153.1-201ENST00000641024 338 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 AC027575.3-201ENST00000583058 2747 ntBASIC5.85□□□□□ -1.47
SLC28A1O00337 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.85□□□□□ -1.47
SLC28A1O00337 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SLC28A1O00337 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC130360.2-201ENST00000533477 1556 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC005261.2-201ENST00000593427 4258 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC28A1O00337 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC28A1O00337 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SLC28A1O00337 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SLC28A1O00337 RN7SKP257-201ENST00000364525 309 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 RNA5SP77-201ENST00000365394 120 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.84□□□□□ -1.47
SLC28A1O00337 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
SLC28A1O00337 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 RPS7P8-201ENST00000418311 581 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 AC073410.1-201ENST00000435125 589 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 RPEP4-201ENST00000437636 602 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 AL512593.1-201ENST00000444758 779 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 PPIAP32-201ENST00000449940 472 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC022730.1-201ENST00000473114 568 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC117500.1-201ENST00000497352 755 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC095052.1-201ENST00000509955 863 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC28A1O00337 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.84□□□□□ -1.47
SLC28A1O00337 RNA5SP96-201ENST00000516041 107 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 snoU109.5-201ENST00000516231 132 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 IGKV2-19-201ENST00000518132 283 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.84□□□□□ -1.47
SLC28A1O00337 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.84□□□□□ -1.47
SLC28A1O00337 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC234775.3-201ENST00000564612 656 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AC119403.2-201ENST00000590960 598 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.84□□□□□ -1.47
SLC28A1O00337 AL122023.1-201ENST00000622847 530 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 AP003400.2-201ENST00000624036 666 ntBASIC5.84□□□□□ -1.47
SLC28A1O00337 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 144.3 ms