Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC8.8□□□□□ -1
HFM1A2PYH4 AL352984.2-201ENST00000611153 546 ntBASIC8.8□□□□□ -1
HFM1A2PYH4 AC020763.5-201ENST00000623298 430 ntBASIC8.8□□□□□ -1
HFM1A2PYH4 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC8.8□□□□□ -1
HFM1A2PYH4 AC005224.3-201ENST00000584683 2140 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC8.79□□□□□ -1
HFM1A2PYH4 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC8.79□□□□□ -1
HFM1A2PYH4 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC8.79□□□□□ -1
HFM1A2PYH4 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.79□□□□□ -1
HFM1A2PYH4 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.79□□□□□ -1
HFM1A2PYH4 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
HFM1A2PYH4 CR788268.1-201ENST00000603931 1809 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 PLCB4-202ENST00000378473 5619 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 MIR375-201ENST00000362103 64 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC8.79□□□□□ -1
HFM1A2PYH4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC8.79□□□□□ -1
HFM1A2PYH4 DNAJC19P5-201ENST00000443295 316 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 AL445665.1-202ENST00000452436 324 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 AC110749.1-201ENST00000462007 357 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 AC124945.1-201ENST00000485133 188 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC8.79□□□□□ -1
HFM1A2PYH4 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC8.79□□□□□ -1
HFM1A2PYH4 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC8.79□□□□□ -1
HFM1A2PYH4 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC8.79□□□□□ -1
HFM1A2PYH4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC8.79□□□□□ -1
HFM1A2PYH4 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 AC135626.1-201ENST00000556983 435 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 MRO-208ENST00000588444 866 ntTSL 3 BASIC8.79□□□□□ -1
HFM1A2PYH4 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.79□□□□□ -1
HFM1A2PYH4 AC145423.1-201ENST00000605712 336 ntBASIC8.79□□□□□ -1
HFM1A2PYH4 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
HFM1A2PYH4 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC8.79□□□□□ -1
HFM1A2PYH4 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC8.79□□□□□ -1
HFM1A2PYH4 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
HFM1A2PYH4 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC8.78□□□□□ -1
HFM1A2PYH4 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC8.78□□□□□ -1
HFM1A2PYH4 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HFM1A2PYH4 ZYG11B-201ENST00000294353 8093 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HFM1A2PYH4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
HFM1A2PYH4 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC8.78□□□□□ -1
HFM1A2PYH4 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HFM1A2PYH4 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC8.78□□□□□ -1
HFM1A2PYH4 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
HFM1A2PYH4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
HFM1A2PYH4 AL589993.1-201ENST00000407450 2524 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC8.78□□□□□ -1
HFM1A2PYH4 ERG-202ENST00000398897 4651 ntTSL 5 BASIC8.78□□□□□ -1
HFM1A2PYH4 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.78□□□□□ -1
HFM1A2PYH4 CUBNP2-201ENST00000443534 1139 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 AP000281.1-201ENST00000444036 316 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.78□□□□□ -1
HFM1A2PYH4 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC8.78□□□□□ -1
HFM1A2PYH4 AL355032.1-201ENST00000472981 438 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC8.78□□□□□ -1
HFM1A2PYH4 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC8.78□□□□□ -1
HFM1A2PYH4 RN7SL57P-201ENST00000493687 290 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.78□□□□□ -1
HFM1A2PYH4 GAPDHP71-201ENST00000511530 1003 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC8.78□□□□□ -1
HFM1A2PYH4 AC079600.1-201ENST00000550326 297 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC8.78□□□□□ -1
HFM1A2PYH4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC8.78□□□□□ -1
HFM1A2PYH4 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.78□□□□□ -1
HFM1A2PYH4 MIR6826-201ENST00000617808 98 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 AL445670.1-201ENST00000618889 801 ntBASIC8.78□□□□□ -1
HFM1A2PYH4 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.78□□□□□ -1
HFM1A2PYH4 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC8.78□□□□□ -1
HFM1A2PYH4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC8.78□□□□□ -1
HFM1A2PYH4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
HFM1A2PYH4 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC8.77□□□□□ -1.01
HFM1A2PYH4 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC8.77□□□□□ -1.01
HFM1A2PYH4 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC8.77□□□□□ -1.01
HFM1A2PYH4 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HFM1A2PYH4 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
HFM1A2PYH4 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
HFM1A2PYH4 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HFM1A2PYH4 RNF213-220ENST00000582970 21055 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
HFM1A2PYH4 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
HFM1A2PYH4 SNORA64.1-201ENST00000362600 132 ntBASIC8.77□□□□□ -1.01
HFM1A2PYH4 RNA5-8SP5-201ENST00000365304 152 ntBASIC8.77□□□□□ -1.01
HFM1A2PYH4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1.01
HFM1A2PYH4 AL121835.1-201ENST00000404250 354 ntBASIC8.77□□□□□ -1.01
HFM1A2PYH4 EEF1B2P8-201ENST00000414101 671 ntBASIC8.77□□□□□ -1.01
HFM1A2PYH4 MRPL53P1-201ENST00000414323 319 ntBASIC8.77□□□□□ -1.01
HFM1A2PYH4 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC8.77□□□□□ -1.01
HFM1A2PYH4 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.77□□□□□ -1.01
HFM1A2PYH4 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC8.77□□□□□ -1.01
HFM1A2PYH4 ACA64.4-201ENST00000459070 127 ntBASIC8.77□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms