Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 RPL29P23-201ENST00000486188 442 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AL117692.1-201ENST00000494283 713 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC093664.1-201ENST00000511779 289 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 IGLV3-6-201ENST00000523937 250 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 OR56A7P-201ENST00000524865 941 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 OR4A17P-201ENST00000526032 904 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AP003033.2-201ENST00000528901 805 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC104072.1-201ENST00000568817 668 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC006116.7-201ENST00000590141 756 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC068020.1-201ENST00000594215 661 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC011500.1-201ENST00000601963 469 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC130352.1-201ENST00000602979 661 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC084373.1-201ENST00000603311 235 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC019257.2-201ENST00000605539 497 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC005899.7-201ENST00000618199 588 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC089999.3-201ENST00000622440 577 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC018692.2-201ENST00000624130 348 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AC114546.4-201ENST00000624413 369 ntBASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC7.33□□□□□ -1.24
COL4A3BPQ9Y5P4 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC074141.1-201ENST00000588129 2995 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC016251.2-201ENST00000623393 3089 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 ZNF90P1-201ENST00000480493 1951 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AP002370.1-201ENST00000528055 1602 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 RNA5SP333-201ENST00000363466 118 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 RNA5SP334-201ENST00000364825 118 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 ATP5F1P6-201ENST00000402768 767 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 TATDN1P1-201ENST00000414123 891 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AL139415.1-201ENST00000424862 352 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC008410.1-201ENST00000483777 339 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC116562.1-201ENST00000485355 781 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC009729.1-201ENST00000548873 1133 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 SNX6P1-201ENST00000601728 1224 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 ABI1P1-201ENST00000603375 1120 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC105148.1-201ENST00000604961 409 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 MIR6780B-201ENST00000610307 79 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC018926.1-201ENST00000616335 435 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC010872.1-201ENST00000624225 675 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AL590396.2-201ENST00000636511 1041 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 AC107980.1-201ENST00000558671 3355 ntBASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 NPL-212ENST00000614468 2376 ntTSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
COL4A3BPQ9Y5P4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms