Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 CD302-202ENST00000429078 3803 ntTSL 2 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AL450263.2-201ENST00000439400 589 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 PPP1R8P1-201ENST00000452549 1044 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 PSD2-AS1-201ENST00000515306 412 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC126177.6-201ENST00000550420 1009 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 MIR205HG-210ENST00000603283 455 ntTSL 3 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AC068726.1-201ENST00000610993 341 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AL020991.1-201ENST00000612314 373 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AL158209.2-201ENST00000619266 216 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AL365217.1-201ENST00000398578 2436 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 ACTR6-209ENST00000551617 1715 ntTSL 5 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 LINC02150-201ENST00000513157 2120 ntTSL 5 BASIC10.4□□□□□ -0.74
PHF8Q9UPP1 AL391666.1-201ENST00000442570 2764 ntBASIC10.4□□□□□ -0.74
PHF8Q9UPP1 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
PHF8Q9UPP1 BCL6-201ENST00000232014 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
PHF8Q9UPP1 LDB2-202ENST00000441778 2476 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
PHF8Q9UPP1 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AL136298.2-201ENST00000556497 1570 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 ZEB2-205ENST00000419938 1755 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 CHRDL1-201ENST00000372042 1934 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 PAX8-AS1-201ENST00000333145 2319 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 GABRR1-202ENST00000435811 3106 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 NR1I2-203ENST00000466380 4306 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 OR10AB1P-202ENST00000641219 1686 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AL645937.1-201ENST00000641739 1652 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 POGZ-205ENST00000409503 4813 ntAPPRIS ALT1 TSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 Y_RNA.529-201ENST00000384586 119 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC007068.1-201ENST00000396690 844 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC004039.1-201ENST00000431165 502 ntTSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 EMC3-AS1-205ENST00000438698 534 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AL031736.1-201ENST00000449688 618 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 MTCO3P11-201ENST00000455103 774 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 RN7SL251P-201ENST00000464175 297 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 RN7SL741P-201ENST00000482473 289 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC079594.1-201ENST00000489757 331 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 FTH1P23-201ENST00000492727 550 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC021678.1-201ENST00000505195 936 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC091133.4-201ENST00000511142 308 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC156455.1-201ENST00000538790 851 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 NPM1P5-201ENST00000557228 838 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC016629.2-201ENST00000597341 199 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 U47924.1-201ENST00000606539 434 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AL365204.3-201ENST00000612448 685 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 PAX6-209ENST00000419022 6888 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 LYRM7-201ENST00000379380 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 SMC6-207ENST00000448223 5233 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AL359924.1-201ENST00000450451 3127 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 SYNJ1-211ENST00000630077 6898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
PHF8Q9UPP1 AC096745.2-201ENST00000627783 1914 ntBASIC10.39□□□□□ -0.75
PHF8Q9UPP1 DDX10P2-201ENST00000417796 2614 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 TRIM6-203ENST00000380107 2590 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 UBXN10-201ENST00000375099 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PHF8Q9UPP1 EEF1A1P12-201ENST00000443590 1346 ntBASIC10.38□□□□□ -0.75
PHF8Q9UPP1 AL391095.1-201ENST00000422519 2004 ntTSL 2 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms