Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 OR3D1P-201ENST00000438288 955 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 RPSAP40-201ENST00000442343 891 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AL034369.1-201ENST00000453808 477 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC090958.1-201ENST00000511122 351 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC021269.1-201ENST00000526860 705 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 SLC25A51P2-201ENST00000535708 889 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC060780.2-201ENST00000589047 198 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC006115.2-201ENST00000596823 202 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 RPL12P48-201ENST00000605620 304 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 MIR6070-201ENST00000613967 103 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC099654.15-201ENST00000639802 509 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AP001153.1-201ENST00000641024 338 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 WDR95P-201ENST00000425638 1542 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VAPAQ9P0L0 AC004076.2-201ENST00000620532 3323 ntBASIC5.68□□□□□ -1.5
VAPAQ9P0L0 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 CDY3P-201ENST00000454543 1618 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC217777.1-201ENST00000570034 1471 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 OR10R3P-201ENST00000361688 942 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RNA5SP77-201ENST00000365394 120 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AL451164.3-201ENST00000441377 447 ntTSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RSU1P1-201ENST00000453416 441 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 SNRPCP3-201ENST00000474888 476 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RN7SL267P-201ENST00000485107 261 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RN7SL284P-201ENST00000498823 275 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC114324.2-202ENST00000503812 134 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 TDGP1-201ENST00000543961 1229 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RN7SL657P-201ENST00000582431 293 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC024267.2-201ENST00000582737 417 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AP001823.1-201ENST00000604056 1003 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 AC140134.1-201ENST00000511830 3544 ntBASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.67□□□□□ -1.5
VAPAQ9P0L0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 DNM1P47-203ENST00000571780 12667 ntBASIC5.66□□□□□ -1.5
VAPAQ9P0L0 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VAPAQ9P0L0 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms