Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 KRTAP9-11P-201ENST00000431013 525 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 LINC00572-201ENST00000450264 575 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC005017.1-201ENST00000482002 490 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RN7SL272P-201ENST00000487762 289 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AL031073.1-201ENST00000503029 1139 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC114967.1-201ENST00000504890 259 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC006499.5-201ENST00000505037 514 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 IMPA1P1-201ENST00000510718 842 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC010342.1-201ENST00000514047 877 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RNU6-327P-201ENST00000516270 127 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AP003080.1-202ENST00000526526 915 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC079598.4-201ENST00000549647 265 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 SRMP2-201ENST00000553832 916 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AL358332.1-201ENST00000555649 813 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC090607.2-201ENST00000560331 695 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC006960.3-201ENST00000561845 705 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 MT1L-202ENST00000566367 78 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC009171.1-201ENST00000572673 266 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 PRR13P4-201ENST00000577786 421 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 NDUFA3P1-201ENST00000588007 252 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC106900.2-201ENST00000604994 317 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RN7SL715P-201ENST00000606972 286 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 CGA-202ENST00000610310 615 ntTSL 3 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RN7SL82P-201ENST00000611435 237 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 U1.34-201ENST00000618578 162 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RN7SL628P-201ENST00000619139 237 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AP000577.1-201ENST00000624366 878 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 OR10R2-203ENST00000641400 975 ntAPPRIS ALT2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 DICER1-204ENST00000527414 6179 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 ZNF415-213ENST00000597503 2469 ntTSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 AC018880.1-201ENST00000418898 1319 ntBASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 ZNF613-201ENST00000293471 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 MAP4K4-212ENST00000456652 3855 ntTSL 5 BASIC7.77□□□□□ -1.17
CUEDC1Q9NWM3 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 ERAP2-201ENST00000379904 3219 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 MTIF2-203ENST00000394600 2221 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 RHOXF1-AS1-201ENST00000553843 2102 ntTSL 2 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 ZCCHC11-201ENST00000257177 5743 ntAPPRIS P4 TSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 AC005539.1-201ENST00000443768 1479 ntBASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 RN7SKP76-201ENST00000364419 323 ntBASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 RN7SKP257-201ENST00000364525 309 ntBASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 AL161787.1-201ENST00000401543 174 ntBASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 AL353052.1-201ENST00000428673 818 ntTSL 3 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 TTC28-AS1-216ENST00000437713 854 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 TRIM60P16-201ENST00000444048 694 ntBASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 GAS5-219ENST00000449289 542 ntTSL 3 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 AC239798.3-201ENST00000454459 408 ntBASIC7.76□□□□□ -1.17
CUEDC1Q9NWM3 CST12P-201ENST00000457644 362 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms