Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 AC080014.1-201ENST00000496877 1201 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 RN7SKP248-201ENST00000516278 305 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC234778.2-201ENST00000566241 354 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC105275.2-201ENST00000567907 711 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AL121834.1-201ENST00000572284 509 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC069366.1-201ENST00000583159 838 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 MIMT1-201ENST00000597105 1050 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 Z69908.1-201ENST00000622603 247 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 RAB11A-201ENST00000261890 4930 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AC011815.2-201ENST00000618230 2021 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 ASNSP6-201ENST00000592770 1618 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 ANKRD44-202ENST00000328737 3686 ntTSL 2 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 AP003471.1-202ENST00000319051 1988 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 ANK2-215ENST00000509550 3638 ntTSL 2 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 ECM1P2-201ENST00000503354 1577 ntBASIC8.35□□□□□ -1.07
EFCC1Q9HA90 FRMD7-203ENST00000464296 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
EFCC1Q9HA90 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 LRBA-204ENST00000507224 8826 ntTSL 5 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 HKR1-223ENST00000591471 3472 ntTSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC092451.3-201ENST00000625067 1343 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 ODF3-202ENST00000342593 386 ntTSL 5 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 RNU6-694P-201ENST00000364071 147 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 RN7SKP191-201ENST00000364713 306 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MIR575-201ENST00000385013 94 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 RNA5SP155-201ENST00000411154 129 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AL773545.3-201ENST00000414297 706 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 SLC9B1P4-201ENST00000421957 1288 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 SPATA20P1-201ENST00000423089 438 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 KCTD9P1-201ENST00000430462 1167 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC044797.1-201ENST00000445744 679 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MTCO2P18-201ENST00000457151 658 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 RNU7-125P-201ENST00000458760 62 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC115223.1-201ENST00000466377 870 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 SSX8-201ENST00000506270 579 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC111194.1-201ENST00000509711 422 ntTSL 3 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 GAPDHP71-201ENST00000511530 1003 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 RNU6-491P-201ENST00000516099 110 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 GLYATL1P4-201ENST00000529326 906 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MTCO2P15-201ENST00000532655 656 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 SETP1-201ENST00000556014 845 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AL590229.1-201ENST00000603497 542 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC124312.4-201ENST00000605533 310 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC068944.2-201ENST00000610373 403 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MIR6071-201ENST00000616741 78 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AL158062.1-201ENST00000619632 745 ntBASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
EFCC1Q9HA90 AC099654.3-201ENST00000447087 1546 ntBASIC8.34□□□□□ -1.08
EFCC1Q9HA90 NCKAP1L-201ENST00000293373 9016 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.08
EFCC1Q9HA90 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
EFCC1Q9HA90 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
EFCC1Q9HA90 NUDT13-202ENST00000357321 2102 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
EFCC1Q9HA90 PLEKHS1-202ENST00000361048 3249 ntAPPRIS P3 TSL 2 BASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms