Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 NDUFB9P1-201ENST00000604683 510 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 SNX18P12-201ENST00000624821 759 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 BDNF-211ENST00000439476 4532 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC011933.2-201ENST00000578539 2790 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 AC027575.3-201ENST00000583058 2747 ntBASIC5.54□□□□□ -1.52
RSPO3Q9BXY4 PSG10P-201ENST00000501199 1500 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 SNORD1C-201ENST00000363315 78 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 OR2W4P-201ENST00000406496 926 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 RPL35AP3-201ENST00000414680 288 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 GAPDHP59-201ENST00000435908 267 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 LDHAP2-201ENST00000437325 985 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AC016724.1-201ENST00000453215 421 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 SNX18P25-201ENST00000510539 758 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 RN7SKP288-201ENST00000516227 268 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AC090888.3-201ENST00000558917 509 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AP001357.1-201ENST00000586304 1053 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AC068768.2-201ENST00000602352 343 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AC093388.1-201ENST00000609166 430 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AL135999.3-201ENST00000610501 812 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AC010325.3-201ENST00000641084 394 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 TTC41P-205ENST00000551270 3963 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 RBMY1HP-201ENST00000382759 1389 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 AC090181.3-201ENST00000624777 1514 ntBASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RSPO3Q9BXY4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 RN7SKP77-201ENST00000363261 353 ntBASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.52□□□□□ -1.53
RSPO3Q9BXY4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms