Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORD46.2-201ENST00000516021 102 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 RNA5SP400-201ENST00000517155 111 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 AP001804.1-201ENST00000526868 919 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 OR4A6P-201ENST00000534364 970 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 NPIPB1P-202ENST00000588786 828 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 FAM72A-208ENST00000607379 1139 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 AC108673.3-201ENST00000609183 335 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 AC005725.1-201ENST00000577346 2607 ntBASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.43□□□□□ -1.22
RPAP1Q9BWH6 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC091305.2-201ENST00000624049 1576 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC011416.1-201ENST00000514947 1732 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 SNORA51.1-201ENST00000363243 140 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 RNU1-59P-201ENST00000364829 162 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 RN7SKP292-201ENST00000365522 317 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 RN7SKP81-201ENST00000365603 331 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC079922.1-201ENST00000443291 359 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 GAPDHP23-201ENST00000444823 993 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC007494.1-201ENST00000562293 760 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 AC022106.1-201ENST00000612834 766 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 U1.25-201ENST00000614085 162 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 RFPL4AP6-201ENST00000616792 846 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 U1.34-201ENST00000618578 162 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 REV3L-214ENST00000619481 969 ntTSL 5 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 U1.31-201ENST00000620022 160 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 OR7A1P-202ENST00000641542 1158 ntBASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC7.42□□□□□ -1.22
RPAP1Q9BWH6 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 RNU1-150P-201ENST00000362491 162 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 Z68694.1-201ENST00000413929 841 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC007562.1-201ENST00000421819 517 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 BX679664.2-201ENST00000439282 283 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC023274.2-201ENST00000445264 521 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC011476.1-201ENST00000466725 307 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 RN7SL273P-201ENST00000481561 299 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 PSMA2P2-201ENST00000504319 686 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC090651.1-201ENST00000567865 634 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC109309.2-201ENST00000612597 332 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 AC073488.3-201ENST00000631611 778 ntBASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
RPAP1Q9BWH6 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms