Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AL603755.1-201ENST00000619504 163 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 uc_338.21-201ENST00000622458 147 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AC130456.6-201ENST00000623745 765 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 AP003108.4-201ENST00000623917 878 ntBASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 LGI1-209ENST00000627699 664 ntTSL 3 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 VNN3-202ENST00000367927 1717 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 HLF-210ENST00000575345 3589 ntTSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
TRAIPQ9BWF2 SGCD-202ENST00000435422 9755 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 MRPS27-202ENST00000457646 2628 ntTSL 2 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 RBPJP2-201ENST00000618187 1444 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 RNU4-81P-201ENST00000363561 144 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 MIR138-2-201ENST00000384916 84 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 RPS3AP5-201ENST00000389400 821 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 CFAP70-204ENST00000394865 1222 ntTSL 5 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL139100.1-201ENST00000408001 498 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 Z83313.1-201ENST00000433780 718 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 TUBBP11-201ENST00000472255 252 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC011979.1-201ENST00000472300 483 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AP003467.1-201ENST00000517397 301 ntTSL 5 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 IGJP1-201ENST00000522682 475 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 IGHVIII-11-1-201ENST00000522733 267 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 PDCL2P2-201ENST00000533651 189 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AP000619.2-201ENST00000546014 969 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 IGHV1OR15-3-201ENST00000564926 351 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 RPS7P1-201ENST00000571702 585 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AP005328.2-201ENST00000606879 657 ntTSL 3 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC091768.1-201ENST00000609258 930 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC055764.2-201ENST00000610089 670 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL360219.1-201ENST00000610230 366 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC100847.1-201ENST00000611316 481 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL161931.1-201ENST00000612768 246 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC009318.3-201ENST00000616916 503 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AL512506.2-201ENST00000624472 458 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC006453.3-201ENST00000635891 377 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 AC233280.20-201ENST00000637412 416 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 ZNF10-202ENST00000402932 1967 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 RALYL-204ENST00000518566 2682 ntAPPRIS ALT2 TSL 2 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 TP53BP1-202ENST00000382039 6015 ntTSL 5 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 MFSD8-218ENST00000641186 4448 ntBASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 KCNK2-203ENST00000444842 3379 ntAPPRIS ALT1 TSL 1 (best) BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 EML5-201ENST00000380664 5910 ntTSL 5 BASIC8.07□□□□□ -1.12
TRAIPQ9BWF2 FLJ42393-201ENST00000623801 2270 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AP000766.1-201ENST00000561746 4140 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC093225.1-201ENST00000506867 1408 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 TTC39DP-201ENST00000416781 1688 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 RBM41-202ENST00000372487 2579 ntAPPRIS ALT1 TSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 LOXHD1-201ENST00000300591 3970 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 GSTA5-201ENST00000284562 845 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 855.4 ms