Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 GTF2IP11-201ENST00000526931 420 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC234917.1-201ENST00000534006 316 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AL359219.2-201ENST00000555184 348 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 OOSP1P2-201ENST00000579644 351 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 MIR4258-201ENST00000580920 91 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 RPL7AP69-201ENST00000595306 806 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC141002.1-201ENST00000607025 279 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AL355974.3-201ENST00000617383 467 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 MIR6807-201ENST00000621968 92 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC079248.1-201ENST00000427568 1546 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AL161756.3-201ENST00000641216 2071 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 AC092376.2-201ENST00000622621 4116 ntBASIC5.92□□□□□ -1.46
CCDC28BQ9BUN5 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 THAP12P9-201ENST00000503971 2360 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AC010894.1-201ENST00000313760 361 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 RNU1-5P-201ENST00000362684 144 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 RNA5SP431-201ENST00000410312 120 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 GTF2IP14-201ENST00000441415 586 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AC239800.1-201ENST00000442049 719 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 SLAMF6P1-201ENST00000451067 602 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 RPL12P31-201ENST00000478433 450 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 CCDC11P1-201ENST00000503137 1162 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 IGKV1D-32-201ENST00000517449 318 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 BCAS2P1-201ENST00000528022 632 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 FCGR1CP-201ENST00000579737 1127 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.91□□□□□ -1.46
CCDC28BQ9BUN5 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AL353133.1-201ENST00000407695 401 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AL358178.1-201ENST00000407698 397 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 MYL6P5-201ENST00000412707 459 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 METTL15P3-201ENST00000415522 1221 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 RPSAP65-201ENST00000429660 595 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 GAPDHP75-201ENST00000433910 943 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 EMC3-AS1-205ENST00000438698 534 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 SOCS5P1-201ENST00000440415 949 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 RSU1P1-201ENST00000453416 441 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 RARRES2P3-201ENST00000457739 473 ntBASIC5.9□□□□□ -1.46
CCDC28BQ9BUN5 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms