Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 DLG1-201ENST00000346964 5034 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AC245047.1-201ENST00000433276 873 ntBASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 IGBP1P1-201ENST00000554337 1009 ntBASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 ZNF791-202ENST00000446165 6412 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 TEK-202ENST00000406359 3935 ntTSL 2 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 ZFYVE26-207ENST00000555452 7309 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 RPL23P2-201ENST00000320371 421 ntBASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 SNORA62-201ENST00000365493 153 ntBASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AC093162.1-201ENST00000419682 124 ntBASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 SNRPCP2-201ENST00000504370 475 ntBASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 AC012414.7-202ENST00000622705 1090 ntBASIC4.9□□□□□ -1.62
CSMD1Q96PZ7 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 MIGA1-201ENST00000370791 5288 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AC100871.1-201ENST00000507871 1456 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AC092070.2-203ENST00000598377 3644 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 RNA5SP305-201ENST00000362665 119 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 HNRNPDLP2-201ENST00000455248 751 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AC103987.1-201ENST00000473394 348 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 RN7SL205P-201ENST00000490174 284 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 OR5AN2P-201ENST00000534535 896 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 NMNAT1P5-201ENST00000559657 841 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 MIR5096-201ENST00000583713 70 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 RN7SL52P-201ENST00000584271 284 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AP001521.2-201ENST00000608772 546 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 RN7SL722P-201ENST00000617780 284 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 RN7SL565P-201ENST00000618246 284 ntBASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 GCNT2-202ENST00000316170 4381 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
CSMD1Q96PZ7 VIL1-201ENST00000248444 6531 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC016583.1-201ENST00000624221 2431 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 RNA5SP505-201ENST00000364748 108 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AL390774.1-201ENST00000411924 246 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AL133465.1-201ENST00000432942 512 ntTSL 3 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 RPS23P7-201ENST00000466210 444 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC091965.3-201ENST00000506236 208 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 HPRT1P1-201ENST00000509498 657 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC073916.1-201ENST00000545095 130 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 MON2-214ENST00000641654 10382 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 GTF2IP4-201ENST00000453092 2054 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 NKTR-201ENST00000232978 7343 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 MYO15A-217ENST00000615845 11860 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 CASC19-281ENST00000642118 1554 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 GREB1L-209ENST00000580732 8749 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 PRICKLE2-204ENST00000564377 8032 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC016027.4-201ENST00000450866 277 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AL049872.1-201ENST00000556323 322 ntBASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 MYOM1-201ENST00000261606 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CSMD1Q96PZ7 AC022034.1-201ENST00000512867 2156 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms