Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC009500.1-201ENST00000420684 583 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINC01384-201ENST00000422494 659 ntTSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 ZDHHC20P2-201ENST00000424108 429 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 UQCRHP1-204ENST00000424609 274 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC092646.1-201ENST00000427142 901 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 HIGD1AP12-201ENST00000427832 281 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 OSTCP2-201ENST00000437956 444 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 FGF7P5-201ENST00000441829 291 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 MTND1P1-201ENST00000445453 368 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 CASP3P1-201ENST00000446037 609 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC005517.1-201ENST00000452091 489 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RPL7L1P3-201ENST00000455249 689 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RPL7P32-201ENST00000457119 744 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RN7SL325P-201ENST00000460434 283 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC091982.1-202ENST00000473923 343 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RPL23AP44-201ENST00000482216 473 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RPS7P11-201ENST00000484240 586 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC021146.7-201ENST00000509604 775 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC146944.3-201ENST00000509969 371 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RPS23-208ENST00000512493 443 ntTSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 TMEM97P2-201ENST00000517841 403 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AP001646.2-201ENST00000528645 1156 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 GLYATL1P4-201ENST00000529326 906 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 NPM1P5-201ENST00000557228 838 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RN7SL42P-201ENST00000579786 294 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC004987.4-201ENST00000603383 338 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC107304.1-201ENST00000604229 296 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC092960.1-201ENST00000604762 351 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AL031601.1-201ENST00000605702 394 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AL592494.3-201ENST00000609485 464 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC009163.6-201ENST00000612367 342 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AC010608.2-201ENST00000624830 470 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AL356585.10-201ENST00000641883 123 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 APP-206ENST00000359726 3294 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 GSDMB-202ENST00000360317 1468 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 AL353743.3-201ENST00000442109 1468 ntBASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC6.71□□□□□ -1.34
PTCHD1Q96NR3 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 KIF27-201ENST00000297814 4653 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 UGT2B25P-201ENST00000511504 1586 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 MAPK10-241ENST00000639234 2985 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL356317.1-201ENST00000396110 1436 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC110716.2-201ENST00000563865 3945 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 BTBD7-208ENST00000555525 2328 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 IARS-205ENST00000443024 4341 ntTSL 5 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 RNU12-2P-201ENST00000364789 156 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 SPRR2D-202ENST00000368756 788 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 FAM204BP-201ENST00000369171 701 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 RNA5SP35-201ENST00000391257 129 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC008171.1-201ENST00000395058 200 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 MTCO1P56-201ENST00000401674 224 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL021407.1-201ENST00000404531 386 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AC024937.2-201ENST00000411669 1242 ntBASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.7□□□□□ -1.34
PTCHD1Q96NR3 RPS7P9-201ENST00000414704 586 ntBASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms