Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC020915.5-201ENST00000596836 964 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 MIR6829-201ENST00000620375 67 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 AC020656.2-201ENST00000613291 5309 ntBASIC5.99□□□□□ -1.45
VPS33AQ96AX1 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VPS33AQ96AX1 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL139184.1-202ENST00000422303 222 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 PTPN2P1-201ENST00000423212 1072 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC016908.1-201ENST00000442571 1219 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 RPS7P4-201ENST00000444127 582 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC022080.2-201ENST00000452932 533 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC112187.1-201ENST00000455837 479 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AKR1D1P1-201ENST00000457236 936 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 RN7SKP198-201ENST00000459286 306 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 snoU13.29-201ENST00000459370 104 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC073594.1-201ENST00000462065 364 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL035690.1-201ENST00000490892 383 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC093870.1-201ENST00000506837 213 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC008868.1-201ENST00000509786 737 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 NPM1P45-201ENST00000583151 559 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 NPIPB1P-202ENST00000588786 828 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AP001267.4-201ENST00000602598 545 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC091167.5-201ENST00000605689 894 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC067838.1-201ENST00000606064 577 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL136097.3-201ENST00000611097 505 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL359955.1-201ENST00000455242 3275 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 AC024651.2-201ENST00000562480 2098 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 OR10AB1P-202ENST00000641219 1686 ntBASIC5.98□□□□□ -1.45
VPS33AQ96AX1 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.98□□□□□ -1.45
VPS33AQ96AX1 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AL139100.1-201ENST00000408001 498 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AL139135.1-201ENST00000412675 209 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 PTP4A1P1-201ENST00000420539 515 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 CDC42P6-201ENST00000421246 576 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 AL356133.1-201ENST00000444762 372 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 C1DP3-201ENST00000455013 423 ntBASIC5.97□□□□□ -1.45
VPS33AQ96AX1 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.97□□□□□ -1.45
VPS33AQ96AX1 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 335.7 ms