Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 RNU1-77P-201ENST00000390868 162 ntBASIC9.8□□□□□ -0.84
TOPBP1Q92547 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 HIGD1AP8-201ENST00000453927 274 ntBASIC9.8□□□□□ -0.84
TOPBP1Q92547 AC087672.1-201ENST00000479876 766 ntBASIC9.8□□□□□ -0.84
TOPBP1Q92547 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC9.8□□□□□ -0.84
TOPBP1Q92547 AL118522.2-201ENST00000616045 615 ntBASIC9.8□□□□□ -0.84
TOPBP1Q92547 AP000550.3-201ENST00000637734 379 ntBASIC9.8□□□□□ -0.84
TOPBP1Q92547 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
TOPBP1Q92547 AC112255.1-201ENST00000624070 2493 ntBASIC9.8□□□□□ -0.84
TOPBP1Q92547 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
TOPBP1Q92547 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
TOPBP1Q92547 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
TOPBP1Q92547 AC068189.1-201ENST00000501164 2632 ntTSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOPBP1Q92547 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TOPBP1Q92547 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOPBP1Q92547 AL390774.1-201ENST00000411924 246 ntBASIC9.79□□□□□ -0.84
TOPBP1Q92547 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 AC108075.1-201ENST00000424692 529 ntBASIC9.79□□□□□ -0.84
TOPBP1Q92547 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 AC015983.1-201ENST00000441577 373 ntBASIC9.79□□□□□ -0.84
TOPBP1Q92547 RPL7P39-201ENST00000481157 744 ntBASIC9.79□□□□□ -0.84
TOPBP1Q92547 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 AL445528.2-201ENST00000620582 470 ntBASIC9.79□□□□□ -0.84
TOPBP1Q92547 EPN1-202ENST00000270460 16219 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 AC110716.2-201ENST00000563865 3945 ntBASIC9.79□□□□□ -0.84
TOPBP1Q92547 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
TOPBP1Q92547 LYRM4-201ENST00000330636 7312 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOPBP1Q92547 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOPBP1Q92547 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
TOPBP1Q92547 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
TOPBP1Q92547 AP002364.1-201ENST00000623330 3386 ntBASIC9.78□□□□□ -0.84
TOPBP1Q92547 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOPBP1Q92547 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 AC005294.1-201ENST00000355509 281 ntBASIC9.78□□□□□ -0.84
TOPBP1Q92547 RNA5SP319-201ENST00000362768 119 ntBASIC9.78□□□□□ -0.84
TOPBP1Q92547 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 MFSD4BP1-201ENST00000513330 1552 ntBASIC9.78□□□□□ -0.84
TOPBP1Q92547 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
TOPBP1Q92547 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOPBP1Q92547 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOPBP1Q92547 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC9.78□□□□□ -0.84
TOPBP1Q92547 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
TOPBP1Q92547 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
TOPBP1Q92547 AC099521.1-201ENST00000482557 334 ntBASIC9.77□□□□□ -0.84
TOPBP1Q92547 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC9.77□□□□□ -0.84
TOPBP1Q92547 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC9.77□□□□□ -0.84
TOPBP1Q92547 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC9.77□□□□□ -0.84
TOPBP1Q92547 MRPS21P7-201ENST00000566937 238 ntBASIC9.77□□□□□ -0.84
TOPBP1Q92547 AC012616.1-201ENST00000600294 197 ntBASIC9.77□□□□□ -0.84
TOPBP1Q92547 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
TOPBP1Q92547 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
TOPBP1Q92547 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC9.77□□□□□ -0.84
TOPBP1Q92547 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOPBP1Q92547 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.77□□□□□ -0.85
TOPBP1Q92547 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOPBP1Q92547 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOPBP1Q92547 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
TOPBP1Q92547 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.77□□□□□ -0.85
TOPBP1Q92547 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC9.77□□□□□ -0.85
TOPBP1Q92547 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOPBP1Q92547 RN7SKP28-201ENST00000364770 305 ntBASIC9.77□□□□□ -0.85
TOPBP1Q92547 RMRPP5-201ENST00000411156 267 ntBASIC9.77□□□□□ -0.85
TOPBP1Q92547 AC006335.2-201ENST00000437993 330 ntBASIC9.77□□□□□ -0.85
TOPBP1Q92547 AL022237.1-201ENST00000446663 358 ntBASIC9.77□□□□□ -0.85
TOPBP1Q92547 AP000547.1-201ENST00000454360 617 ntBASIC9.77□□□□□ -0.85
TOPBP1Q92547 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC9.77□□□□□ -0.85
TOPBP1Q92547 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC9.77□□□□□ -0.85
TOPBP1Q92547 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC9.77□□□□□ -0.85
TOPBP1Q92547 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC9.77□□□□□ -0.85
TOPBP1Q92547 AC104785.1-201ENST00000603220 588 ntBASIC9.77□□□□□ -0.85
TOPBP1Q92547 AC000068.2-201ENST00000608816 460 ntBASIC9.77□□□□□ -0.85
TOPBP1Q92547 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
TOPBP1Q92547 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 DNAH11-202ENST00000409508 14167 ntAPPRIS P2 TSL 5 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
TOPBP1Q92547 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
TOPBP1Q92547 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC9.76□□□□□ -0.85
TOPBP1Q92547 AL136531.3-201ENST00000624378 3658 ntBASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms