Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AL136531.3-201ENST00000624378 3658 ntBASIC6.4□□□□□ -1.39
HMGB4Q8WW32 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
HMGB4Q8WW32 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 KARSP1-201ENST00000451871 1752 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 CLEC5A-206ENST00000546910 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 DCDC2-201ENST00000378450 3684 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 RNA5SP110-201ENST00000362638 115 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 SLC20A1P1-201ENST00000413906 956 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 RPL12P16-201ENST00000431098 498 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC023141.3-201ENST00000436698 278 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AL353662.1-201ENST00000439099 327 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC073109.1-201ENST00000445066 978 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC016687.1-201ENST00000482574 353 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 LINC02059-201ENST00000503843 452 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 SNORA26.10-201ENST00000516427 141 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 LINC00557-201ENST00000563184 1279 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 LINC00556-201ENST00000569603 412 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC090616.1-201ENST00000583895 447 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC005332.4-201ENST00000592752 579 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC040174.2-201ENST00000602701 465 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC084036.1-201ENST00000609190 508 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AP000894.4-201ENST00000610185 483 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC005393.1-201ENST00000617916 584 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC129778.1-202ENST00000623812 261 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AL591379.1-207ENST00000635982 261 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC6.39□□□□□ -1.39
HMGB4Q8WW32 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 MAPK10-323ENST00000641493 3207 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 CAST-202ENST00000325674 3356 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 RN7SKP69-201ENST00000365390 305 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AL353625.1-202ENST00000366273 571 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 UBE2V1P15-201ENST00000407776 448 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC104843.2-201ENST00000427666 297 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 MTND5P8-201ENST00000449817 1083 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 RN7SL834P-201ENST00000461450 286 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 RN7SL705P-201ENST00000481678 294 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC095057.1-201ENST00000507583 168 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 MTATP6P1-201ENST00000514057 681 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 SETP12-201ENST00000514068 805 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 PRMT5P1-201ENST00000514351 598 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 RNA5SP340-201ENST00000517132 107 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC060775.1-201ENST00000518241 520 ntBASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGB4Q8WW32 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 84.4 ms