Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 RPL23AP17-201ENST00000401064 499 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC015977.1-201ENST00000418887 292 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 IGLV3-4-201ENST00000432300 244 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 RARRES2P3-201ENST00000457739 473 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 CYP4F27P-201ENST00000514557 494 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 MRPS5P3-201ENST00000515577 166 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 SNORA74.1-201ENST00000516320 180 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC090286.3-201ENST00000573133 187 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 RNU4ATAC-201ENST00000580972 127 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 GLYATL1P2-202ENST00000588046 902 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC008555.7-201ENST00000605008 583 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 OSTC-205ENST00000613215 876 ntTSL 2 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AL138960.1-201ENST00000613838 513 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AL138693.1-201ENST00000622219 129 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC018628.1-201ENST00000624147 3819 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC138627.1-204ENST00000641894 765 ntBASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
TRAF3IP1Q8TDR0 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 IMMTP1-201ENST00000435590 2219 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 Z95114.1-201ENST00000624264 14574 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 RNA5SP375-201ENST00000362975 119 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 RN7SKP38-201ENST00000410782 309 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 RPL34P27-201ENST00000428810 349 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC013403.1-201ENST00000436954 263 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC010086.1-201ENST00000437359 1052 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 RPL5P16-201ENST00000471467 790 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 SNRPCP11-201ENST00000492453 205 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC090958.1-201ENST00000511122 351 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 TPM3P3-201ENST00000521343 354 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC005632.2-201ENST00000564271 828 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC115989.2-201ENST00000578640 563 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC107993.1-201ENST00000591343 684 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC125494.2-201ENST00000602431 657 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 NDUFB9P1-201ENST00000604683 510 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 RPSAP75-201ENST00000605848 301 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC141002.1-201ENST00000607025 279 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AC005899.6-201ENST00000620729 297 ntBASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
TRAF3IP1Q8TDR0 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 LINC01613-201ENST00000561476 2780 ntBASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.35□□□□□ -1.39
TRAF3IP1Q8TDR0 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 166.7 ms