Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 RNU1-24P-201ENST00000364285 165 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 AL445466.1-201ENST00000448432 357 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 RNA5SP362-201ENST00000516048 118 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 SMARCE1P3-201ENST00000553649 1231 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 ZNF322P1-201ENST00000568013 1209 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC141002.1-201ENST00000607025 279 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC096861.1-201ENST00000616652 240 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 MIR6730-201ENST00000622213 67 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 AC012254.5-201ENST00000623573 478 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 CCT5-215ENST00000625723 135 ntTSL 5 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.64□□□□□ -1.19
SYNE4Q8N205 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
SYNE4Q8N205 OR13C1P-202ENST00000641378 2919 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 NCOA4P3-201ENST00000513203 1877 ntBASIC7.64□□□□□ -1.19
SYNE4Q8N205 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC123769.1-201ENST00000530992 3192 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 RN7SKP77-201ENST00000363261 353 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 SDHDP6-201ENST00000414693 480 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC073310.1-201ENST00000423226 1033 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 UBE2V2P3-201ENST00000433562 437 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 RPSAP37-201ENST00000470913 821 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 OR52A4P-202ENST00000481634 799 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 OR52A4P-203ENST00000498233 1014 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 SCARNA9-201ENST00000530422 353 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 MYL6-213ENST00000549017 502 ntTSL 3 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 GNG2-208ENST00000554875 430 ntTSL 5 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC233702.7-202ENST00000582941 211 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 AL133406.3-201ENST00000606817 541 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 AL359922.2-201ENST00000581788 3017 ntBASIC7.63□□□□□ -1.19
SYNE4Q8N205 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
SYNE4Q8N205 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.63□□□□□ -1.19
SYNE4Q8N205 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 HDAC1P2-201ENST00000453661 1398 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
SYNE4Q8N205 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 MIR143-201ENST00000385300 106 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 GAS5-218ENST00000448718 565 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 MGAT2P1-201ENST00000449718 797 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 RPS27AP3-201ENST00000453803 454 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 AC008676.3-201ENST00000521237 435 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 AP000648.1-201ENST00000529682 397 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 AC022404.1-201ENST00000555320 273 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 AL390726.5-202ENST00000564800 256 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC7.62□□□□□ -1.19
SYNE4Q8N205 AL139041.1-201ENST00000605480 610 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 AL031601.1-201ENST00000605702 394 ntBASIC7.62□□□□□ -1.19
SYNE4Q8N205 AP000864.1-201ENST00000609424 650 ntBASIC7.62□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms