Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 ZMYM6-202ENST00000357182 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PTCHD4Q6ZW05 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MIR365B-201ENST00000362317 111 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MIR99A-201ENST00000384906 81 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MIR301B-201ENST00000390813 78 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 RNA5SP474-201ENST00000391234 90 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MRPS33-202ENST00000393008 853 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 ST13P16-201ENST00000401760 781 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC098592.2-201ENST00000413158 265 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC245884.2-201ENST00000426257 404 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MTND2P2-201ENST00000434633 945 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 VN1R38P-201ENST00000450265 887 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 RAB28P2-201ENST00000454299 641 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 RPS16P9-201ENST00000477220 427 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC025271.1-201ENST00000485045 429 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC091965.3-201ENST00000506236 208 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 ENPP7P3-201ENST00000509123 241 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 UBTFL9-201ENST00000534504 1148 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 DCN-215ENST00000550099 719 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 YWHAZP1-201ENST00000556286 722 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC233266.2-201ENST00000567067 528 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 WDR45BP1-201ENST00000583470 1029 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AL049840.5-201ENST00000602827 552 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC024589.2-201ENST00000605642 1294 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC004775.1-201ENST00000607389 753 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 RACK1-235ENST00000626067 564 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MIR665-201ENST00000635949 72 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AC022167.5-202ENST00000637237 701 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 OR6C71P-202ENST00000641886 1107 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 AL645568.2-201ENST00000432815 1337 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 NEK2P2-201ENST00000438441 1338 ntBASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
PTCHD4Q6ZW05 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.45
PTCHD4Q6ZW05 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
PTCHD4Q6ZW05 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.96□□□□□ -1.45
PTCHD4Q6ZW05 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.96□□□□□ -1.45
PTCHD4Q6ZW05 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.96□□□□□ -1.45
PTCHD4Q6ZW05 AC093909.5-201ENST00000621839 1799 ntBASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
PTCHD4Q6ZW05 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 194.6 ms