Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 U3.14-201ENST00000365363 227 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 RN7SKP1-201ENST00000365525 307 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 RN7SKP30-201ENST00000411373 334 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC012451.1-201ENST00000412312 357 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 MYB-206ENST00000420123 1051 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 TEX41-206ENST00000432608 661 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 USP24P1-201ENST00000433802 779 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC013403.1-201ENST00000436954 263 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 RPL23AP64-201ENST00000469465 435 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC008945.1-201ENST00000505144 499 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 SNX18P23-201ENST00000510867 677 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 OR5M6P-201ENST00000530227 937 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AL132640.2-202ENST00000559732 614 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC122134.1-201ENST00000565664 1104 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 MIR4675-201ENST00000577898 77 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 RN7SL25P-201ENST00000583862 260 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 MIR132-201ENST00000591554 101 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 OR51C1P-201ENST00000608504 942 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC004839.1-201ENST00000610269 501 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC003992.1-201ENST00000635364 557 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 MIR665-201ENST00000635949 72 ntBASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.83□□□□□ -1.64
KCNIP4Q6PIL6 AC093849.1-201ENST00000563631 2209 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 RBPJP2-201ENST00000618187 1444 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 MIR365B-201ENST00000362317 111 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AC002524.1-201ENST00000411687 547 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 RPL12P10-201ENST00000413498 498 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AL391869.1-201ENST00000414581 475 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 GRPEL2P2-201ENST00000421856 670 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 CBWD5-209ENST00000430059 1242 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AL731534.1-201ENST00000434711 269 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 VNN3-210ENST00000450865 596 ntTSL 4 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 RPS27AP3-201ENST00000453803 454 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AL133480.2-201ENST00000456723 487 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 TRBV5-2-201ENST00000489095 273 ntBASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC4.82□□□□□ -1.64
KCNIP4Q6PIL6 snoU109.5-201ENST00000516231 132 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms