Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 HSPA8P17-201ENST00000427029 1382 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC090774.4-201ENST00000578888 1372 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 AC011504.1-201ENST00000623331 4103 ntBASIC5.64□□□□□ -1.51
C11orf88Q6PI97 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
C11orf88Q6PI97 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 BLNK-203ENST00000413476 1599 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 MIR99A-201ENST00000384906 81 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 HMGB3P7-201ENST00000400214 611 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL049697.3-201ENST00000406493 982 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL035696.2-201ENST00000407941 709 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 HSFX3-201ENST00000431993 1264 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL022324.2-201ENST00000434827 780 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL157884.3-201ENST00000448273 1184 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL445991.1-201ENST00000450381 475 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 NPM1P9-201ENST00000453156 844 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC010878.1-201ENST00000456500 1047 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 GAPDHP53-201ENST00000458397 924 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 RPSAP24-201ENST00000461543 873 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 RPS26P6-201ENST00000475156 348 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC117525.1-201ENST00000515228 503 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 OR52K3P-201ENST00000531655 943 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC010287.1-201ENST00000566916 357 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 LINC01919-201ENST00000578610 568 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC048341.3-201ENST00000619323 491 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL161420.1-201ENST00000619393 264 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AP005212.3-201ENST00000619964 528 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 Z83818.2-201ENST00000635331 433 ntTSL 3 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.63□□□□□ -1.51
C11orf88Q6PI97 AC010266.2-201ENST00000564741 3255 ntBASIC5.63□□□□□ -1.51
C11orf88Q6PI97 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 OR4K1-201ENST00000285600 1076 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC5.62□□□□□ -1.51
C11orf88Q6PI97 RNU1-46P-201ENST00000384425 164 ntBASIC5.62□□□□□ -1.51
C11orf88Q6PI97 MIR187-201ENST00000385062 109 ntBASIC5.62□□□□□ -1.51
C11orf88Q6PI97 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms