Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AL357153.4-201ENST00000620487 1016 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AC015689.2-201ENST00000528172 1738 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AL132656.3-201ENST00000606384 1595 ntBASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.12□□□□□ -1.27
SHROOM1Q2M3G4 AC004014.2-201ENST00000623718 5122 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 AP004289.1-201ENST00000436307 2205 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 SNRPEP6-201ENST00000407465 277 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 AC016027.4-201ENST00000450866 277 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 AC023141.9-201ENST00000458734 412 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 RPS26P39-201ENST00000469206 341 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 IGHVIII-67-4-201ENST00000524281 296 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 OR5D2P-201ENST00000524390 911 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 DPPA3P2-202ENST00000557188 1219 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 ZNF402P-201ENST00000404435 3100 ntBASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.11□□□□□ -1.27
SHROOM1Q2M3G4 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 ZNF585A-201ENST00000292841 8618 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AL451046.1-201ENST00000406097 534 ntBASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AC064862.4-201ENST00000442180 334 ntBASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AC110749.1-201ENST00000462007 357 ntBASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 PCNAP4-201ENST00000532690 730 ntBASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AL049840.6-201ENST00000604583 345 ntBASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AL731556.1-201ENST00000394628 3711 ntBASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 MCTP2-201ENST00000357742 7555 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHROOM1Q2M3G4 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 NEPNP-201ENST00000404786 1371 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 CDY5P-201ENST00000411487 1580 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 CDY9P-201ENST00000451397 1580 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 U3.25-201ENST00000391209 220 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 AL035660.1-201ENST00000422041 222 ntBASIC7.09□□□□□ -1.27
SHROOM1Q2M3G4 BMS1P10-201ENST00000443754 1120 ntBASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms