Protein–RNA interactions for Protein: Q13635

PTCH1, Protein patched homolog 1, humanhuman

Predictions only

Length 1,447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1Q13635 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC8.34□□□□□ -1.07
PTCH1Q13635 AC003992.1-201ENST00000635364 557 ntBASIC8.34□□□□□ -1.07
PTCH1Q13635 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
PTCH1Q13635 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
PTCH1Q13635 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
PTCH1Q13635 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PTCH1Q13635 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PTCH1Q13635 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PTCH1Q13635 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.33□□□□□ -1.08
PTCH1Q13635 RNA5SP183-201ENST00000362452 119 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
PTCH1Q13635 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC8.33□□□□□ -1.08
PTCH1Q13635 AC083795.1-201ENST00000491760 320 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 IGHV1-14-201ENST00000523391 241 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 MINCR-206ENST00000524335 499 ntTSL 2 BASIC8.33□□□□□ -1.08
PTCH1Q13635 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
PTCH1Q13635 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC8.33□□□□□ -1.08
PTCH1Q13635 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC8.33□□□□□ -1.08
PTCH1Q13635 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 CYCSP1-201ENST00000604815 315 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC8.33□□□□□ -1.08
PTCH1Q13635 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
PTCH1Q13635 NDRG3-204ENST00000373803 2978 ntTSL 5 BASIC8.33□□□□□ -1.08
PTCH1Q13635 AL136531.3-201ENST00000624378 3658 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.33□□□□□ -1.08
PTCH1Q13635 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
PTCH1Q13635 SALL4P7-201ENST00000555779 3120 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 AC011815.2-201ENST00000618230 2021 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 AP002370.1-201ENST00000528055 1602 ntBASIC8.33□□□□□ -1.08
PTCH1Q13635 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC8.32□□□□□ -1.08
PTCH1Q13635 PABPC1P8-201ENST00000452851 2086 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC8.32□□□□□ -1.08
PTCH1Q13635 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC8.32□□□□□ -1.08
PTCH1Q13635 TTC3P1-201ENST00000399586 6081 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
PTCH1Q13635 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 PPP2R2B-202ENST00000394409 10704 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 AL645927.1-201ENST00000396783 406 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 RN7SKP59-201ENST00000410520 314 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC8.32□□□□□ -1.08
PTCH1Q13635 CUBNP2-201ENST00000443534 1139 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 RPL23AP60-201ENST00000450011 454 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC8.32□□□□□ -1.08
PTCH1Q13635 AC004815.1-201ENST00000484185 331 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC8.32□□□□□ -1.08
PTCH1Q13635 NRBF2P4-201ENST00000520874 850 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 IGLV3-30-201ENST00000524362 298 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC8.32□□□□□ -1.08
PTCH1Q13635 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC8.32□□□□□ -1.08
PTCH1Q13635 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC8.32□□□□□ -1.08
PTCH1Q13635 AL450226.2-201ENST00000622913 439 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC8.32□□□□□ -1.08
PTCH1Q13635 AC022726.2-201ENST00000634673 547 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 AC087269.2-201ENST00000641764 975 ntBASIC8.32□□□□□ -1.08
PTCH1Q13635 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.32□□□□□ -1.08
PTCH1Q13635 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
PTCH1Q13635 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
PTCH1Q13635 ATP1A1-203ENST00000369496 3572 ntTSL 2 BASIC8.32□□□□□ -1.08
PTCH1Q13635 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC8.31□□□□□ -1.08
PTCH1Q13635 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
PTCH1Q13635 RNA5SP375-201ENST00000362975 119 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 CAV1-204ENST00000393470 598 ntTSL 4 BASIC8.31□□□□□ -1.08
PTCH1Q13635 MIR1286-201ENST00000408112 78 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 RPA2P2-201ENST00000419698 796 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC8.31□□□□□ -1.08
PTCH1Q13635 AC113412.1-201ENST00000425840 504 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 AC012075.1-201ENST00000436549 580 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 HIGD1AP5-201ENST00000529959 259 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC8.31□□□□□ -1.08
PTCH1Q13635 AC024255.1-201ENST00000614376 102 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 AC021766.1-201ENST00000624404 741 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 AC007683.2-201ENST00000624681 714 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC8.31□□□□□ -1.08
PTCH1Q13635 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
PTCH1Q13635 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC8.31□□□□□ -1.08
PTCH1Q13635 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC8.31□□□□□ -1.08
PTCH1Q13635 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC8.31□□□□□ -1.08
PTCH1Q13635 LINC02019-201ENST00000608605 2060 ntBASIC8.31□□□□□ -1.08
PTCH1Q13635 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
PTCH1Q13635 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms