Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RPL31P20-201ENST00000449593 360 ntBASIC6□□□□□ -1.45
RAE1P78406 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6□□□□□ -1.45
RAE1P78406 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC6□□□□□ -1.45
RAE1P78406 AL034369.1-201ENST00000453808 477 ntBASIC6□□□□□ -1.45
RAE1P78406 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC6□□□□□ -1.45
RAE1P78406 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 AC016687.1-201ENST00000482574 353 ntBASIC6□□□□□ -1.45
RAE1P78406 AC093663.2-201ENST00000484625 313 ntBASIC6□□□□□ -1.45
RAE1P78406 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 RN7SL714P-201ENST00000487050 298 ntBASIC6□□□□□ -1.45
RAE1P78406 AC015524.1-201ENST00000491585 472 ntBASIC6□□□□□ -1.45
RAE1P78406 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 AC018639.1-201ENST00000492994 442 ntBASIC6□□□□□ -1.45
RAE1P78406 AC093801.2-201ENST00000503966 1050 ntBASIC6□□□□□ -1.45
RAE1P78406 AC112198.4-201ENST00000515450 351 ntBASIC6□□□□□ -1.45
RAE1P78406 SNORA76.2-201ENST00000517095 137 ntBASIC6□□□□□ -1.45
RAE1P78406 COX6C-205ENST00000520468 1098 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 IGHV4-55-201ENST00000520889 368 ntBASIC6□□□□□ -1.45
RAE1P78406 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6□□□□□ -1.45
RAE1P78406 AC008055.1-201ENST00000547032 609 ntBASIC6□□□□□ -1.45
RAE1P78406 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6□□□□□ -1.45
RAE1P78406 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6□□□□□ -1.45
RAE1P78406 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6□□□□□ -1.45
RAE1P78406 MIR4732-201ENST00000581873 76 ntBASIC6□□□□□ -1.45
RAE1P78406 AL390877.1-201ENST00000605704 214 ntBASIC6□□□□□ -1.45
RAE1P78406 AF129408.1-201ENST00000608767 431 ntBASIC6□□□□□ -1.45
RAE1P78406 AC006924.1-201ENST00000610750 559 ntBASIC6□□□□□ -1.45
RAE1P78406 CXADRP3-202ENST00000617265 1100 ntBASIC6□□□□□ -1.45
RAE1P78406 MIR7159-201ENST00000620587 66 ntBASIC6□□□□□ -1.45
RAE1P78406 AC211486.4-201ENST00000621495 113 ntBASIC6□□□□□ -1.45
RAE1P78406 CLUHP10-201ENST00000631979 980 ntBASIC6□□□□□ -1.45
RAE1P78406 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
RAE1P78406 HDAC1P2-201ENST00000453661 1398 ntBASIC6□□□□□ -1.45
RAE1P78406 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
RAE1P78406 SHQ1P1-201ENST00000437111 1544 ntBASIC5.99□□□□□ -1.45
RAE1P78406 CREM-203ENST00000344351 1625 ntTSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 AC096921.2-201ENST00000561507 1916 ntBASIC5.99□□□□□ -1.45
RAE1P78406 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
RAE1P78406 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 AC139426.3-201ENST00000605648 2059 ntBASIC5.99□□□□□ -1.45
RAE1P78406 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.99□□□□□ -1.45
RAE1P78406 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 SNORD94-201ENST00000386037 137 ntBASIC5.99□□□□□ -1.45
RAE1P78406 AC003045.1-201ENST00000398779 713 ntBASIC5.99□□□□□ -1.45
RAE1P78406 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.99□□□□□ -1.45
RAE1P78406 RPL21P50-201ENST00000417698 477 ntBASIC5.99□□□□□ -1.45
RAE1P78406 VN1R37P-201ENST00000419096 748 ntBASIC5.99□□□□□ -1.45
RAE1P78406 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 RPS7P14-201ENST00000426405 583 ntBASIC5.99□□□□□ -1.45
RAE1P78406 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 NPM1P23-201ENST00000440193 849 ntBASIC5.99□□□□□ -1.45
RAE1P78406 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 XKRY2-201ENST00000442362 1093 ntBASIC5.99□□□□□ -1.45
RAE1P78406 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 PPIAP32-201ENST00000449940 472 ntBASIC5.99□□□□□ -1.45
RAE1P78406 OR52I1-201ENST00000450052 1050 ntBASIC5.99□□□□□ -1.45
RAE1P78406 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.99□□□□□ -1.45
RAE1P78406 AP002345.1-201ENST00000456493 928 ntBASIC5.99□□□□□ -1.45
RAE1P78406 RN7SL643P-201ENST00000471845 291 ntBASIC5.99□□□□□ -1.45
RAE1P78406 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
RAE1P78406 AC108729.1-201ENST00000487812 947 ntBASIC5.99□□□□□ -1.45
RAE1P78406 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
RAE1P78406 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.99□□□□□ -1.45
RAE1P78406 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 RNU6-1102P-201ENST00000516149 96 ntBASIC5.99□□□□□ -1.45
RAE1P78406 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.99□□□□□ -1.45
RAE1P78406 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 CASP1P2-201ENST00000526830 1258 ntBASIC5.99□□□□□ -1.45
RAE1P78406 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.99□□□□□ -1.45
RAE1P78406 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.99□□□□□ -1.45
RAE1P78406 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.99□□□□□ -1.45
RAE1P78406 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms