Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 AC005725.1-201ENST00000577346 2607 ntBASIC5.34□□□□□ -1.55
HIST1H3AP68431 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HIST1H3AP68431 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HIST1H3AP68431 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HIST1H3AP68431 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HIST1H3AP68431 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
HIST1H3AP68431 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
HIST1H3AP68431 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
HIST1H3AP68431 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 RN7SKP186-201ENST00000365371 303 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 MIR188-201ENST00000385034 86 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL096800.1-201ENST00000405326 893 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 RPL7AP51-201ENST00000422016 760 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AC021876.1-201ENST00000425959 359 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL365220.1-201ENST00000432923 399 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AC097359.1-201ENST00000447946 463 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 SNRPCP3-201ENST00000474888 476 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 MRPS5P3-201ENST00000515577 166 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AC021269.1-201ENST00000526860 705 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 ARGFXP2-201ENST00000579304 949 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 MIR132-201ENST00000591554 101 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 AC096861.1-201ENST00000616652 240 ntBASIC5.33□□□□□ -1.56
HIST1H3AP68431 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.33□□□□□ -1.56
HIST1H3AP68431 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HIST1H3AP68431 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 RN7SKP184-201ENST00000362348 333 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 SNORA21-201ENST00000362423 132 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 SNORD1C-201ENST00000363315 78 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 MIR191-201ENST00000384873 92 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL121977.1-201ENST00000401636 979 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL096829.1-201ENST00000413677 457 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL035422.1-201ENST00000414193 397 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC010086.1-201ENST00000437359 1052 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 RN7SL836P-201ENST00000476140 296 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 RPL12P30-201ENST00000488389 499 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC116917.1-201ENST00000520558 305 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC005479.3-201ENST00000602790 431 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL049840.6-201ENST00000604583 345 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL135999.3-201ENST00000610501 812 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AL355974.3-201ENST00000617383 467 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.32□□□□□ -1.56
HIST1H3AP68431 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC123769.1-201ENST00000530992 3192 ntBASIC5.32□□□□□ -1.56
HIST1H3AP68431 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HIST1H3AP68431 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms