Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CDH13P55290 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CDH13P55290 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CDH13P55290 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CDH13P55290 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6□□□□□ -1.45
CDH13P55290 ICE2P1-201ENST00000512800 1849 ntBASIC6□□□□□ -1.45
CDH13P55290 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
CDH13P55290 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 RNU4-23P-201ENST00000362839 140 ntBASIC6□□□□□ -1.45
CDH13P55290 RN7SKP257-201ENST00000364525 309 ntBASIC6□□□□□ -1.45
CDH13P55290 RNA5SP485-201ENST00000365053 119 ntBASIC6□□□□□ -1.45
CDH13P55290 SNORD94-201ENST00000386037 137 ntBASIC6□□□□□ -1.45
CDH13P55290 VIM2P-201ENST00000402383 1294 ntBASIC6□□□□□ -1.45
CDH13P55290 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6□□□□□ -1.45
CDH13P55290 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6□□□□□ -1.45
CDH13P55290 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 OSTCP4-201ENST00000424397 449 ntBASIC6□□□□□ -1.45
CDH13P55290 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6□□□□□ -1.45
CDH13P55290 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6□□□□□ -1.45
CDH13P55290 AL731534.1-201ENST00000434711 269 ntBASIC6□□□□□ -1.45
CDH13P55290 OR2L9P-201ENST00000444456 913 ntBASIC6□□□□□ -1.45
CDH13P55290 RSL24D1P2-201ENST00000445584 366 ntBASIC6□□□□□ -1.45
CDH13P55290 PPIAP32-201ENST00000449940 472 ntBASIC6□□□□□ -1.45
CDH13P55290 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 RPS7P11-201ENST00000484240 586 ntBASIC6□□□□□ -1.45
CDH13P55290 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6□□□□□ -1.45
CDH13P55290 CYP4F27P-201ENST00000514557 494 ntBASIC6□□□□□ -1.45
CDH13P55290 SNORA48.9-201ENST00000516419 162 ntBASIC6□□□□□ -1.45
CDH13P55290 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6□□□□□ -1.45
CDH13P55290 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6□□□□□ -1.45
CDH13P55290 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6□□□□□ -1.45
CDH13P55290 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6□□□□□ -1.45
CDH13P55290 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6□□□□□ -1.45
CDH13P55290 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC6□□□□□ -1.45
CDH13P55290 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CDH13P55290 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6□□□□□ -1.45
CDH13P55290 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6□□□□□ -1.45
CDH13P55290 VN1R81P-201ENST00000602085 372 ntBASIC6□□□□□ -1.45
CDH13P55290 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6□□□□□ -1.45
CDH13P55290 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6□□□□□ -1.45
CDH13P55290 Xist_exon4.1-201ENST00000615964 126 ntBASIC6□□□□□ -1.45
CDH13P55290 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6□□□□□ -1.45
CDH13P55290 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 AC130360.2-201ENST00000533477 1556 ntBASIC6□□□□□ -1.45
CDH13P55290 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6□□□□□ -1.45
CDH13P55290 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
CDH13P55290 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC6□□□□□ -1.45
CDH13P55290 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6□□□□□ -1.45
CDH13P55290 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
CDH13P55290 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
CDH13P55290 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6□□□□□ -1.45
CDH13P55290 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 SAMMSON-210ENST00000641260 1308 ntBASIC5.99□□□□□ -1.45
CDH13P55290 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 CASC19-246ENST00000641625 1606 ntBASIC5.99□□□□□ -1.45
CDH13P55290 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH13P55290 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH13P55290 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 CUL4AP1-201ENST00000514750 1863 ntBASIC5.99□□□□□ -1.45
CDH13P55290 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
CDH13P55290 RNA5SP375-201ENST00000362975 119 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AL589994.1-201ENST00000404962 340 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH13P55290 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH13P55290 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 PSMD8P1-201ENST00000436275 769 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH13P55290 AL031681.1-201ENST00000443304 400 ntBASIC5.99□□□□□ -1.45
CDH13P55290 CXCR2P1-202ENST00000443392 1074 ntBASIC5.99□□□□□ -1.45
CDH13P55290 WDR82P2-201ENST00000444540 928 ntBASIC5.99□□□□□ -1.45
CDH13P55290 OR6C72P-201ENST00000451403 892 ntBASIC5.99□□□□□ -1.45
CDH13P55290 RAB28P2-201ENST00000454299 641 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AGGF1P3-201ENST00000493675 1213 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH13P55290 AC093816.1-201ENST00000515076 913 ntBASIC5.99□□□□□ -1.45
CDH13P55290 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.99□□□□□ -1.45
CDH13P55290 TPM3P3-201ENST00000521343 354 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH13P55290 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.99□□□□□ -1.45
CDH13P55290 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.99□□□□□ -1.45
CDH13P55290 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH13P55290 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.99□□□□□ -1.45
CDH13P55290 AL049874.4-201ENST00000557593 255 ntBASIC5.99□□□□□ -1.45
CDH13P55290 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms