Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 OR4A6P-201ENST00000534364 970 ntBASIC6.3□□□□□ -1.4
CDH6P55285 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH6P55285 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.3□□□□□ -1.4
CDH6P55285 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH6P55285 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH6P55285 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.3□□□□□ -1.4
CDH6P55285 AL136097.3-201ENST00000611097 505 ntBASIC6.3□□□□□ -1.4
CDH6P55285 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 AL109924.4-201ENST00000623089 670 ntBASIC6.3□□□□□ -1.4
CDH6P55285 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CDH6P55285 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.3□□□□□ -1.4
CDH6P55285 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CDH6P55285 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CDH6P55285 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CDH6P55285 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.3□□□□□ -1.4
CDH6P55285 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH6P55285 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CDH6P55285 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CDH6P55285 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 SNORA21-201ENST00000362423 132 ntBASIC6.29□□□□□ -1.4
CDH6P55285 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CDH6P55285 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 YWHAZP6-201ENST00000399764 738 ntBASIC6.29□□□□□ -1.4
CDH6P55285 AL132875.1-201ENST00000403623 949 ntBASIC6.29□□□□□ -1.4
CDH6P55285 AL035422.1-201ENST00000414193 397 ntBASIC6.29□□□□□ -1.4
CDH6P55285 AL365220.1-201ENST00000432923 399 ntBASIC6.29□□□□□ -1.4
CDH6P55285 CLNS1AP1-201ENST00000435954 682 ntBASIC6.29□□□□□ -1.4
CDH6P55285 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH6P55285 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH6P55285 TIMM8BP2-201ENST00000445940 251 ntBASIC6.29□□□□□ -1.4
CDH6P55285 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH6P55285 AC002553.3-201ENST00000453002 341 ntBASIC6.29□□□□□ -1.4
CDH6P55285 RN7SL254P-201ENST00000460609 284 ntBASIC6.29□□□□□ -1.4
CDH6P55285 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH6P55285 EIF4E2P2-201ENST00000492033 736 ntBASIC6.29□□□□□ -1.4
CDH6P55285 CCDC11P1-201ENST00000503137 1162 ntBASIC6.29□□□□□ -1.4
CDH6P55285 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH6P55285 RN7SKP67-201ENST00000515905 235 ntBASIC6.29□□□□□ -1.4
CDH6P55285 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CDH6P55285 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH6P55285 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
CDH6P55285 MRPS21P8-201ENST00000569196 235 ntBASIC6.29□□□□□ -1.4
CDH6P55285 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH6P55285 uc_338.31-201ENST00000615595 186 ntBASIC6.29□□□□□ -1.4
CDH6P55285 AC027575.3-201ENST00000583058 2747 ntBASIC6.29□□□□□ -1.4
CDH6P55285 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 NCOA4P2-201ENST00000340589 1813 ntBASIC6.29□□□□□ -1.4
CDH6P55285 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH6P55285 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.29□□□□□ -1.4
CDH6P55285 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH6P55285 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH6P55285 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 ZNF402P-201ENST00000404435 3100 ntBASIC6.28□□□□□ -1.4
CDH6P55285 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 DNM1P47-203ENST00000571780 12667 ntBASIC6.28□□□□□ -1.4
CDH6P55285 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 OR10R3P-201ENST00000361688 942 ntBASIC6.28□□□□□ -1.4
CDH6P55285 RN7SKP166-201ENST00000410812 305 ntBASIC6.28□□□□□ -1.4
CDH6P55285 RPS26P38-201ENST00000414476 348 ntBASIC6.28□□□□□ -1.4
CDH6P55285 RPL23AP18-201ENST00000416139 468 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH6P55285 AC130360.1-201ENST00000425489 1117 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC108479.1-201ENST00000431142 427 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC069277.1-205ENST00000432743 630 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH6P55285 GAPDHP59-201ENST00000435908 267 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AL390879.1-201ENST00000439143 386 ntBASIC6.28□□□□□ -1.4
CDH6P55285 SEPT14P12-201ENST00000442280 560 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC010240.2-201ENST00000445363 1205 ntBASIC6.28□□□□□ -1.4
CDH6P55285 ACA64.4-201ENST00000459070 127 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC112484.3-201ENST00000505910 329 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH6P55285 MAST4-IT1-201ENST00000514241 658 ntBASIC6.28□□□□□ -1.4
CDH6P55285 CR383658.1-201ENST00000514609 734 ntBASIC6.28□□□□□ -1.4
CDH6P55285 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 OR56A7P-201ENST00000524865 941 ntBASIC6.28□□□□□ -1.4
CDH6P55285 AC130365.2-201ENST00000525882 1201 ntBASIC6.28□□□□□ -1.4
CDH6P55285 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH6P55285 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH6P55285 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 125.7 ms