Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC110597.1-201ENST00000562669 3176 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 AC010401.2-201ENST00000575137 4934 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 AC022613.3-201ENST00000560740 1346 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
LIMK1P53667 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LIMK1P53667 RN7SKP286-201ENST00000410894 299 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 SDHDP6-201ENST00000414693 480 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AC117434.1-201ENST00000419971 836 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK1P53667 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK1P53667 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 MTND6P5-201ENST00000448266 512 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 VN1R38P-201ENST00000450265 887 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.33□□□□□ -1.4
LIMK1P53667 RPSAP39-201ENST00000467439 883 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.33□□□□□ -1.4
LIMK1P53667 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.33□□□□□ -1.4
LIMK1P53667 RNA5SP206-201ENST00000516703 121 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.33□□□□□ -1.4
LIMK1P53667 DAAM1-208ENST00000556135 582 ntTSL 3 BASIC6.33□□□□□ -1.4
LIMK1P53667 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 MIR1273E-201ENST00000581165 102 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.33□□□□□ -1.4
LIMK1P53667 AC067852.5-201ENST00000589299 310 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AC245014.3-201ENST00000618589 347 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 OR1N1-202ENST00000619659 939 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AP001264.1-201ENST00000620602 703 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 MTCO1P7-201ENST00000419523 1542 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
LIMK1P53667 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
LIMK1P53667 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 AC073365.1-203ENST00000641055 1992 ntBASIC6.33□□□□□ -1.4
LIMK1P53667 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.33□□□□□ -1.4
LIMK1P53667 RGS5-215ENST00000439699 1441 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
LIMK1P53667 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.32□□□□□ -1.4
LIMK1P53667 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 CR383656.5-201ENST00000547616 1340 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 AC007842.1-201ENST00000597336 2039 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AP000432.2-201ENST00000624164 2048 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.32□□□□□ -1.4
LIMK1P53667 OR52B3P-201ENST00000314715 928 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 SNORA58B-201ENST00000364259 136 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 XAGE5-202ENST00000375501 415 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
LIMK1P53667 AL451142.1-201ENST00000375867 775 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 RPL9P21-201ENST00000392269 505 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.32□□□□□ -1.4
LIMK1P53667 AL391361.1-201ENST00000405580 489 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AL445213.1-201ENST00000412589 747 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 MTND4LP17-201ENST00000414607 293 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 REREP1Y-201ENST00000422655 198 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 REREP2Y-201ENST00000439103 200 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
LIMK1P53667 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 RN7SL643P-201ENST00000471845 291 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 RN7SL382P-201ENST00000482631 282 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 RPS23P1-201ENST00000491662 432 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 AC008126.1-201ENST00000549019 480 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AC079600.1-201ENST00000550326 297 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AC068305.2-201ENST00000550567 1205 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.32□□□□□ -1.4
LIMK1P53667 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 MIR4489-201ENST00000578869 62 ntBASIC6.32□□□□□ -1.4
LIMK1P53667 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC6.32□□□□□ -1.4
LIMK1P53667 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC6.32□□□□□ -1.4
LIMK1P53667 RNA5SP440-201ENST00000612665 119 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms