Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC110373.1-201ENST00000505994 3505 ntBASIC6.49□□□□□ -1.37
BRCC3P46736 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 FTO-215ENST00000636491 1676 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
BRCC3P46736 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.49□□□□□ -1.37
BRCC3P46736 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.49□□□□□ -1.37
BRCC3P46736 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCC3P46736 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
BRCC3P46736 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCC3P46736 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCC3P46736 AL391261.1-201ENST00000555712 1479 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCC3P46736 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCC3P46736 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCC3P46736 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 OR52B3P-201ENST00000314715 928 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.48□□□□□ -1.37
BRCC3P46736 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.48□□□□□ -1.37
BRCC3P46736 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC6.48□□□□□ -1.37
BRCC3P46736 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 RNA5SP435-201ENST00000364044 108 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 RNU105B-201ENST00000364478 208 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 AL031985.1-201ENST00000392713 418 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 MIR1203-201ENST00000408812 85 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.48□□□□□ -1.37
BRCC3P46736 AC104843.2-201ENST00000427666 297 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 VN1R110P-201ENST00000438988 971 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 PPIAP20-201ENST00000449839 135 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 AC103563.5-201ENST00000455643 364 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 AC011476.1-201ENST00000466725 307 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 RPL7P51-201ENST00000490532 749 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCC3P46736 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.48□□□□□ -1.37
BRCC3P46736 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC6.48□□□□□ -1.37
BRCC3P46736 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.48□□□□□ -1.37
BRCC3P46736 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.48□□□□□ -1.37
BRCC3P46736 AC016542.2-201ENST00000624201 619 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
BRCC3P46736 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 RBPJP7-201ENST00000442803 1447 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 RBPJP5-201ENST00000449433 1447 ntBASIC6.48□□□□□ -1.37
BRCC3P46736 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.48□□□□□ -1.37
BRCC3P46736 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
BRCC3P46736 AL359091.1-201ENST00000449048 1734 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCC3P46736 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
BRCC3P46736 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCC3P46736 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCC3P46736 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCC3P46736 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCC3P46736 GNL2P1-201ENST00000451274 2190 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
BRCC3P46736 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.47□□□□□ -1.37
BRCC3P46736 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCC3P46736 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCC3P46736 SEPT7P2-202ENST00000398921 823 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 SNRPEP6-201ENST00000407465 277 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC6.47□□□□□ -1.37
BRCC3P46736 BX284632.2-201ENST00000421091 399 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 RPL23AP19-201ENST00000436229 369 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AL512605.1-202ENST00000441919 381 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 OR13K1P-201ENST00000444577 975 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AL359955.2-201ENST00000445380 353 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AL022237.1-201ENST00000446663 358 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AC112187.1-201ENST00000455837 479 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AC007998.1-201ENST00000474156 672 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AC092865.4-201ENST00000477936 615 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 MTATP6P1-201ENST00000514057 681 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 SETP21-201ENST00000514799 892 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.47□□□□□ -1.37
BRCC3P46736 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.47□□□□□ -1.37
BRCC3P46736 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.47□□□□□ -1.37
BRCC3P46736 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.47□□□□□ -1.37
BRCC3P46736 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.47□□□□□ -1.37
BRCC3P46736 MIR4776-2-201ENST00000580204 80 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AC024589.2-201ENST00000605642 1294 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AL021918.2-201ENST00000613415 194 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AP005431.1-201ENST00000618479 319 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 AC103703.1-201ENST00000634783 663 ntBASIC6.47□□□□□ -1.37
BRCC3P46736 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
BRCC3P46736 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
BRCC3P46736 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms