Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 AL662791.3-201ENST00000413771 776 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 SMARCE1P1-201ENST00000417747 1186 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AL359633.1-201ENST00000421403 310 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-1P43699 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC005517.1-201ENST00000452091 489 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 RPL19P11-201ENST00000495944 589 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-1P43699 IGKV2D-38-201ENST00000518423 240 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 CASC11-203ENST00000519071 791 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AP001646.2-201ENST00000528645 1156 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.14□□□□□ -1.59
NKX2-1P43699 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC092953.2-201ENST00000608000 699 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 OR51C1P-201ENST00000608504 942 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AC073488.9-201ENST00000631601 754 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AC000095.2-202ENST00000637415 154 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AP000550.3-201ENST00000637734 379 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC092070.2-203ENST00000598377 3644 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 PSMC1P4-201ENST00000515236 1327 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC025470.1-201ENST00000510053 2032 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 AC087516.1-201ENST00000561236 2428 ntBASIC5.14□□□□□ -1.59
NKX2-1P43699 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
NKX2-1P43699 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.14□□□□□ -1.59
NKX2-1P43699 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
NKX2-1P43699 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-1P43699 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-1P43699 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NKX2-1P43699 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.13□□□□□ -1.59
NKX2-1P43699 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
NKX2-1P43699 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 MTND5P23-201ENST00000430812 1655 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-1P43699 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
NKX2-1P43699 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
NKX2-1P43699 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 OR13C3-201ENST00000374781 1108 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 RNU6-152P-201ENST00000384037 107 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 AC245036.1-201ENST00000391727 309 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 LDHAP5-201ENST00000394996 622 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 AL391419.1-201ENST00000398901 1275 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-1P43699 EEF1B2P8-201ENST00000414101 671 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-1P43699 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-1P43699 PUDPP2-201ENST00000431423 643 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC5.13□□□□□ -1.59
NKX2-1P43699 RPL14P5-201ENST00000436474 730 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
NKX2-1P43699 AC083855.1-201ENST00000440041 258 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 AC027124.1-201ENST00000440852 466 ntBASIC5.13□□□□□ -1.59
NKX2-1P43699 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.13□□□□□ -1.59
NKX2-1P43699 GAPDHP33-201ENST00000443168 1013 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms