Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.09□□□□□ -1.43
RPA3P35244 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.09□□□□□ -1.43
RPA3P35244 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.09□□□□□ -1.43
RPA3P35244 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.09□□□□□ -1.43
RPA3P35244 RPL7AP14-201ENST00000424041 802 ntBASIC6.09□□□□□ -1.43
RPA3P35244 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPA3P35244 AC010086.1-201ENST00000437359 1052 ntBASIC6.09□□□□□ -1.43
RPA3P35244 AL645936.1-201ENST00000441979 518 ntBASIC6.09□□□□□ -1.43
RPA3P35244 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.09□□□□□ -1.43
RPA3P35244 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RPA3P35244 RN7SL552P-201ENST00000462094 276 ntBASIC6.09□□□□□ -1.43
RPA3P35244 RN7SL836P-201ENST00000476140 296 ntBASIC6.09□□□□□ -1.43
RPA3P35244 RN7SL326P-201ENST00000477493 296 ntBASIC6.09□□□□□ -1.43
RPA3P35244 RPL9P15-201ENST00000491096 532 ntBASIC6.09□□□□□ -1.43
RPA3P35244 AC113367.2-201ENST00000505749 160 ntBASIC6.09□□□□□ -1.43
RPA3P35244 OR4D12P-201ENST00000509361 911 ntBASIC6.09□□□□□ -1.43
RPA3P35244 KHDC1P1-201ENST00000511053 508 ntBASIC6.09□□□□□ -1.43
RPA3P35244 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.09□□□□□ -1.43
RPA3P35244 NPIPB14P-203ENST00000532298 987 ntBASIC6.09□□□□□ -1.43
RPA3P35244 AP001858.2-201ENST00000536213 601 ntBASIC6.09□□□□□ -1.43
RPA3P35244 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.09□□□□□ -1.43
RPA3P35244 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.09□□□□□ -1.43
RPA3P35244 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC6.09□□□□□ -1.43
RPA3P35244 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.09□□□□□ -1.43
RPA3P35244 AC005632.2-201ENST00000564271 828 ntBASIC6.09□□□□□ -1.43
RPA3P35244 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.09□□□□□ -1.43
RPA3P35244 AL591167.1-201ENST00000607321 456 ntBASIC6.09□□□□□ -1.43
RPA3P35244 RN7SL261P-201ENST00000613441 282 ntBASIC6.09□□□□□ -1.43
RPA3P35244 AC069542.2-201ENST00000624816 216 ntBASIC6.09□□□□□ -1.43
RPA3P35244 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.09□□□□□ -1.43
RPA3P35244 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.09□□□□□ -1.43
RPA3P35244 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPA3P35244 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RPA3P35244 AC004076.2-201ENST00000620532 3323 ntBASIC6.09□□□□□ -1.43
RPA3P35244 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
RPA3P35244 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPA3P35244 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.09□□□□□ -1.43
RPA3P35244 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RPA3P35244 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RPA3P35244 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RPA3P35244 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RPA3P35244 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RPA3P35244 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RPA3P35244 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RPA3P35244 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
RPA3P35244 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 AC063923.1-201ENST00000478982 1619 ntBASIC6.08□□□□□ -1.44
RPA3P35244 AL133243.2-201ENST00000610331 1621 ntBASIC6.08□□□□□ -1.44
RPA3P35244 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 RN7SKP121-201ENST00000410842 305 ntBASIC6.08□□□□□ -1.44
RPA3P35244 THEM7P-201ENST00000419556 672 ntBASIC6.08□□□□□ -1.44
RPA3P35244 AL139158.1-201ENST00000424719 340 ntBASIC6.08□□□□□ -1.44
RPA3P35244 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 RPL23AP60-201ENST00000450011 454 ntBASIC6.08□□□□□ -1.44
RPA3P35244 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.08□□□□□ -1.44
RPA3P35244 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.08□□□□□ -1.44
RPA3P35244 RPL12P31-201ENST00000478433 450 ntBASIC6.08□□□□□ -1.44
RPA3P35244 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 EIF4E2P2-201ENST00000492033 736 ntBASIC6.08□□□□□ -1.44
RPA3P35244 SNX18P24-201ENST00000505249 671 ntBASIC6.08□□□□□ -1.44
RPA3P35244 RNA5SP206-201ENST00000516703 121 ntBASIC6.08□□□□□ -1.44
RPA3P35244 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.08□□□□□ -1.44
RPA3P35244 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.08□□□□□ -1.44
RPA3P35244 OR4A41P-201ENST00000533053 928 ntBASIC6.08□□□□□ -1.44
RPA3P35244 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.08□□□□□ -1.44
RPA3P35244 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.08□□□□□ -1.44
RPA3P35244 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.08□□□□□ -1.44
RPA3P35244 AC005828.7-201ENST00000607331 556 ntBASIC6.08□□□□□ -1.44
RPA3P35244 uc_338.29-201ENST00000615099 168 ntBASIC6.08□□□□□ -1.44
RPA3P35244 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.08□□□□□ -1.44
RPA3P35244 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RPA3P35244 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 AC027279.4-201ENST00000624371 2072 ntBASIC6.08□□□□□ -1.44
RPA3P35244 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.08□□□□□ -1.44
RPA3P35244 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
RPA3P35244 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RPA3P35244 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms